Mycobacterium lepromatosis: MLPF_2027
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Entry
MLPF_2027 CDS
T08064
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mlm
Mycobacterium lepromatosis
Brite
KEGG Orthology (KO) [BR:
mlm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MLPF_2027 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlm03021
]
MLPF_2027 (rpoD)
Transcription machinery [BR:
mlm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MLPF_2027 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UKN42534
LinkDB
All DBs
Position
complement(1976947..1978692)
Genome browser
AA seq
581 aa
AA seq
DB search
MVIGGRPTGSASTHADINADTFDIADTFGYPCPNPPEVSPTEGVYVAATKTSPATGQPVK
RTATKTPATPAKRSATKAPNGSAPAKRATNTASRATNTASRATNTASRATKSATPPKKAA
EASDAAKKTRTSAKNADTKAPSARDRTAKASAAKDTLNDPEATLDTLDSDGTADDLDAEP
DLDVEPSADIDIDIDIDAADLSLDDLEDDDVVTDIEPGETEDGEATAATKTDEASTDDDE
EIAEPTEKDKASGDFVWDEDESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEV
ELAKRIEAGLYATQLMTELSERGAKLPTTQRRDMMWICRDGDRAKNHLLEANLRLVVSLA
KRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIR
IPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTI
GDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPR
TLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQILRDYLD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcggcggtcgcccgaccggtagcgcgagtactcacgctgatatcaacgccgac
acattcgacatagcagacactttcggttacccatgcccaaacccgccggaagtgagtcca
accgaaggggtgtacgtggcagcgaccaagacaagtccggcaaccggtcagccggtgaag
cgtaccgccaccaagacgcccgcgacccccgccaaacgatcggcaacgaaggcaccaaat
ggctccgcccccgcaaaacgagccaccaatacagcatctcgagccaccaatacagcatct
cgagccaccaatacagcatctcgagccaccaaatcagcgacgccacccaaaaaagccgcc
gaggcaagcgacgctgcgaagaagacccgcacctcggccaaaaacgccgatacaaaggcg
ccgtccgcgcgggaccgcacagctaaagcctcggcagctaaagacaccctgaacgatccc
gaagctaccctggacaccctcgactccgacggcactgccgacgacctcgatgccgaaccg
gacctcgacgttgagcccagcgcagacatcgacatcgacatcgacatcgacgccgccgac
ctcagtctcgatgacctcgaagacgacgacgtagtcacagacatcgaaccaggtgaaacc
gaggatggcgaagctaccgcagccaccaagaccgacgaagcttccacggatgatgacgaa
gagatcgctgaaccgaccgaaaaagacaaggcttcgggcgatttcgtctgggacgaagat
gaatccgaggcgttgcgtcaggcccgcaaggatgccgagctcaccgcatcggcggactca
gttcgcgcgtacctcaaacagatcggcaaggtggccttgctcaacgccgaggaagaggtg
gagctggcgaaacggatcgaagctggcctatacgccacgcagctgatgaccgagctgtct
gagcgcggcgccaaactgccaaccacccaacgccgcgacatgatgtggatctgtcgcgac
ggcgatcgtgcgaaaaaccatctgttggaagccaacctgcggctggtggtttcgcttgct
aagcgctacaccggccgcgggatggccttccttgacctgatccaggaaggcaacctgggc
ctgatccgggcagtcgaaaagttcgactacaccaaggggtacaagttctcgacgtacgcg
acgtggtggatccgccaggccatcacccgcgccatggccgaccaagcccgcaccatccgc
atcccagtccacatggtcgaggtgattaacaagctcggccgtattcagcgcgaactacta
caggatctgggccgcgagcccacgcctgaagagctcgcaaaagagatggacatcacgcct
gaaaaagtactcgagatccagcaatacgctcgtgaaccaatctcattggatcagaccatc
ggcgatgagggcgacagccagctgggcgatttcatcgaggatagtgaagcggtggtggcc
gtagatgcggtatcgtttacgttgctgcaagaccagctacagtcggtgctggagacactc
tcagaacgcgaggccggcgtagtgcggcttcgcttcggcctcactgacggccagccgcgc
accctcgacgaaattggccaggtctacggcgtgacccgcgaacgcatccgccagatcgag
tccaagacgatgtcgaagttacgccaccccagccgttcccagatcttgcgcgactacctt
gactag
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