Mesorhizobium loti NZP2037: A9174_05945
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Entry
A9174_05945 CDS
T04711
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mln
Mesorhizobium loti NZP2037
Pathway
mln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9174_05945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mln03019
]
A9174_05945
03400 DNA repair and recombination proteins [BR:
mln03400
]
A9174_05945
Enzymes [BR:
mln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A9174_05945
Messenger RNA biogenesis [BR:
mln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A9174_05945
DNA repair and recombination proteins [BR:
mln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A9174_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
AAA_22
DUF7466
Motif
Other DBs
NCBI-ProteinID:
ANN56363
LinkDB
All DBs
Position
1241423..1243258
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AA seq
611 aa
AA seq
DB search
MSAQAASVRAEDPKQRVLKDVFGFDGFRPGQADVMDALLGGRHVLAVMPTGAGKSLCYQV
PALVMGGLTLVVSPLVALMQDQVAALRLAGVGADTINSSLDREANVAAWRRVASGQTRLL
YLAPERLMTERMLDALSRLEISLIAIDEAHCISQWGPAFRPEYEDLSRLRHIFPNVPIIA
VTATADESTRSDIEARLFAERVETLVLGFDRPNIKLAIESKQDSKRQLLRFIERHPGKSG
IVYCLSRKKTEEMAAFLEKNGVTALAYHAGMSKDAREANQNAFMTLSGVVMVATIAFGMG
IDKPDVAYVFHTDMPGSLEAYYQEIGRAGRDGRKAEAHMLYGLGDIRMRRLFIDDEDAAV
EHKKRAHRRLDTLIGYCETAQCRRQVLLGYFGEEAEPCGNCDNCLEQVPRADGGAEARII
LAAVAQSGERFGAAHVIDILLGHETEKIVARGHQKLASFGSGAAHKKDLWQSLIRQLVAG
GFLEPDPSGHGGLAIAEKGHALGRGEIQFHYRVEMRSRALRKMRAAEGSGAEGVDASLLA
TLKSLRLRLAKERQVPAYVVFSDRTLIDMAERRPRDLDAFAEVNGVGGAKLKEFGAIFVK
AIAAHRSDGSA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcacaggcagcgagtgttcgggcggaggatcccaagcagcgcgtcctgaaggac
gtgttcggcttcgacggtttccgcccgggccaggcagatgtcatggacgcgctgctcggc
gggcgccatgtgctggccgtcatgccgacgggtgcgggcaaatcgctctgctaccaggtg
ccggcgctggtcatgggtgggctcaccctggtcgtgtcgccgctggtggcgctgatgcag
gatcaggtcgcggccttgcggctggcgggcgttggcgccgatacgatcaattcctcgctc
gaccgggaggccaatgtcgccgcctggcgacgcgtggcatcaggccagacgcggctgctc
tatctggcgccggaacggctgatgaccgagcgcatgctcgatgcgctttccaggctcgaa
atcagcctgatcgccatcgacgaggcgcattgcatctcgcaatggggtccggcgttccgg
cctgagtatgaggatttgtcgcgcctgcgccacatcttccccaacgtgccgatcatcgcg
gtgacggcgacggcggacgagagcacgcgcagcgatatcgaggcacggctgttcgccgag
cgggtcgaaacgctggtgctgggtttcgaccggccaaacatcaagctcgccatcgaatcc
aaacaggacagcaagcggcaattgctgcgtttcatcgagcgtcacccgggcaagagcggc
atcgtctactgcctgtcgcgcaagaagacggaggagatggcggccttcctcgagaagaac
ggcgtcaccgcgctcgcctatcacgccggcatgagcaaggacgcgcgcgaggccaatcag
aacgccttcatgacgctgtccggcgtcgtcatggtggcaaccatcgccttcggcatgggc
atcgacaagcccgacgtcgcctatgtcttccacaccgacatgccgggcagcctggaggcc
tattatcaggagatcggccgtgccggccgtgacgggcgcaaggccgaggcgcatatgctg
tatgggcttggcgacatccgcatgcggcggctgttcatcgacgacgaggatgctgcggtc
gagcacaagaagcgcgcgcatcgccggctcgacaccctgatcggctattgcgagactgcg
cagtgccgccgccaggtgctgcttggctatttcggagaagaagccgagccctgcggcaat
tgtgacaactgcctcgagcaggtgccgcgcgccgatggcggcgcggaagcacgcatcatc
ctggccgcggtcgcgcagagcggcgagcgcttcggcgccgcccatgtcatcgatatcctg
ctcggccatgagaccgagaagatcgtggcccgcggtcaccagaagcttgccagcttcggc
agcggcgcggcgcacaagaaggatctctggcaatcgctgatccggcagctcgtcgccggc
ggtttcctcgagccggatccgagcggtcatggcggcctcgccatcgccgagaaaggccat
gcgctcggccgtggcgagatccagttccactatcgtgtcgagatgcgcagccgcgccttg
cgcaagatgcgagccgcggagggttcgggtgccgaaggcgtcgatgcttcgctgctggcg
acgctcaaatccctgcggctgcggctggccaaggagcgccaggtgccggcctatgtggtg
ttttccgaccgcacgctgatcgacatggccgaacgccgcccgcgcgacctcgacgccttt
gccgaggtcaacggcgtgggaggggcgaagctcaaggagttcggggcgatttttgtcaag
gcgattgcggcgcaccggtcggacgggtcggcctga
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