Mesorhizobium loti NZP2037: A9174_19235
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Entry
A9174_19235 CDS
T04711
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mln
Mesorhizobium loti NZP2037
Pathway
mln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9174_19235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mln03019
]
A9174_19235
Messenger RNA biogenesis [BR:
mln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A9174_19235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ANN58668
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Position
4003701..4005371
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AA seq
556 aa
AA seq
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MAKAENAELVFVPLGGVGEIGMNFALYGYGPPSAREWIVIDVGVTFPDAAHPGVDLILPD
TRFIEENLANLRGIIITHAHEDHYGALLDIWPRLKAPVWMTPFSAGLLEAKRQGEQGAPK
IPLTIYRAGEKFTVGPFEIEAIPVAHSIPEPMSLAITTPAGTVIHTGDWKIDPEPTIGPK
TDEARFRAYGDKGVLALICDSTNALREGESPSEVAVGEGLKGVIQSAVGRVAVTTFSSNV
GRIVSIAKAARDAGRQCLVLGRSLKRVIDVADELGYMDGLPEFIAEEDFGFIPRENLVII
CTGSQGEPLAALAKLSRDEMKSVSLTAGDTVVFSSRTIPGNEKAILEIKNRLIDLGIKII
EDGDALVHVSGHPRRSELRKMYEWVRPKIGVPVHGEAAHLVAQGSLMSTSGIGQVAQVRD
GDMLRLAPGPATIIDQVPFGRIYKDGNLIGTDQAMGIRDRRKLSFAGHVAVNVVLDDKYE
LAGDPDLVAIGVAEADASGETLEDLMIDAAVGAVDSIPRQRRKDLDLVQEAVRRAVRGAA
NEAWGKKPLVTVFVTR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcggaaaacgccgaactcgtcttcgtgccgctcggcggcgtcggcgagatc
ggcatgaacttcgccctctacggctacggcccgccgagcgcgcgcgaatggatcgtcatc
gatgtcggcgtcacctttcccgacgcggcgcatccgggcgtcgacctgatcctgcccgac
acccgcttcatcgaggagaacctcgctaatctgcgcggcatcatcatcacccacgcgcat
gaggaccattatggcgcgctgctcgacatctggccgaggctgaaggcccccgtgtggatg
acgccgttcagtgccgggctgctggaagccaagcggcagggcgagcagggggcgccgaag
attccgctgacgatctaccgggccggggagaaattcaccgtcggtccgttcgagatcgaa
gccattccggtggcgcactccatccccgagccgatgtcgctggccatcaccacgccagcc
ggcacggtcatccacaccggcgactggaagatcgatccggaaccgacgatcgggccgaag
accgacgaggcgcgcttccgtgcctatggcgacaagggcgtgctggcgctgatctgcgat
tcgaccaatgcgctgcgggaaggggaatcgccgtcggaagtggcggttggcgaggggctc
aagggcgtcatccagagtgccgtcggccgtgtcgccgtgacgaccttctcctccaatgtc
gggcgtatcgtttccatcgccaaggcggcgcgcgatgccggccgccagtgcctggtgctc
ggccgctcgttgaagcgcgttatcgacgttgccgacgagcttggctatatggacggcctg
ccggaattcattgccgaggaggacttcggcttcatcccgcgcgaaaaccttgtcatcatc
tgcaccggcagccagggcgagccgctggcggcgctggcaaaactgtcgcgcgacgagatg
aaatcggtgtcgctgacggcaggcgatacggtggtgttctcctcacgcaccatccccggc
aatgagaaggcgatcctcgagatcaagaaccgcctgatcgatctcggcatcaagatcatc
gaggacggcgacgcgctggtgcacgtctccggccatccccggcgcagcgagttgcgcaag
atgtatgagtgggtgcgcccaaagatcggcgttcccgtgcatggcgaggcggcgcatctt
gtggcgcagggctcgctgatgtcgacctccggcatcggccaggtggcgcaggtgcgcgac
ggcgacatgctgcggctcgctcccggccccgccaccatcatcgaccaggtgccgttcggt
cgcatctacaaggacggcaatctgatcggcaccgaccaggcgatgggcattcgcgaccgg
cgcaaactgtcctttgccggccatgtcgcggtcaatgtcgtgctcgacgacaaatacgag
ctcgccggcgatcccgatctggtcgccatcggggtcgccgaggccgacgccagcggcgag
acgctggaggatttgatgatcgatgcggccgtcggtgcggtcgattcgattccccgccag
cggcgcaaggacctcgacctggtacaggaagcggtgcggcgcgcggtgcgcggcgccgcc
aacgaagcctggggcaagaagccgctggtgacggtgttcgtcaccagatga
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