Mesorhizobium loti NZP2037: A9174_23070
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Entry
A9174_23070 CDS
T04711
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mln
Mesorhizobium loti NZP2037
Pathway
mln03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
A9174_23070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mln03400
]
A9174_23070
Enzymes [BR:
mln01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
A9174_23070
DNA repair and recombination proteins [BR:
mln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
A9174_23070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
RNA_ligase
mRNA_cap_enzyme
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
ANN59320
LinkDB
All DBs
Position
4807388..4808251
Genome browser
AA seq
287 aa
AA seq
DB search
MRLRFIAPLMPALVEQPPEGDGWIHEVKFDGYRSQLIIDEDGTRIYTRNGHDWTARYRDL
VKEAANIGADNTIVDGEIIVLNEAGLSDFGELRKAITRRQHDLYFVAFDLLHLNGHDLRE
MALEERREILASMIEPGGRIQFSEPLPGEAKAIFHLLDQAGLEGMVSKRKDSKYRSGPST
SWLKAKCYSVDEYELIGVEREAGKPAFALMADRKTGRYVGSAFINSSQAIRERLWKRVQE
HAGPAPQGMKRPATQWVKPGIIGRVKHLRGEEDLRHGSLQDFRLETD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgaggttcatcgctcccttgatgccggcccttgtcgagcagcctccagaaggc
gacggctggattcacgaggtgaagttcgacggctaccgctcgcaactgatcatcgatgag
gacggcaccaggatctacacgcgtaacggtcacgactggacggccagatatcgcgacctg
gtgaaagaggcggcgaacatcggcgccgacaatacgatcgttgacggtgagatcatcgtt
ttgaacgaggccggcctgtccgacttcggcgagctgcgaaaggcgatcaccaggcggcaa
cacgacctgtatttcgtggccttcgaccttctgcacctcaacggccacgaccttcgcgaa
atggcgctggaggagcgccgcgagatcctggccagcatgatcgagcccggcgggcgtatt
cagttcagcgagccattgccgggcgaagcgaaggccatcttccatctgctcgaccaggct
gggcttgagggcatggtttcgaagcgcaaggatagcaaataccgcagcggtccgtcgacg
agctggttgaaggcgaaatgctactctgtcgacgaatacgagctgattggcgtcgagcgt
gaagccggcaagccggcctttgccctgatggccgatcgcaaaaccggccgctatgtcggt
tcggccttcatcaactccagccaggctatccgcgagcggctgtggaagcgtgtccaggag
catgctgggcctgcgccccaggggatgaagcgaccggcgacgcaatgggtcaagcctggc
atcattggccgtgtgaagcacttgcgcggcgaagaggatctgcggcacggttcgctgcag
gatttccggctggagacggactga
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