Mesorhizobium loti NZP2037: A9174_23405
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Entry
A9174_23405 CDS
T04711
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mln
Mesorhizobium loti NZP2037
Pathway
mln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9174_23405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mln03019
]
A9174_23405
Enzymes [BR:
mln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A9174_23405
Messenger RNA biogenesis [BR:
mln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A9174_23405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ANN59383
LinkDB
All DBs
Position
complement(4873432..4874853)
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AA seq
473 aa
AA seq
DB search
MTNENTLPGNDTAELSGFAALGITGALLKATHNAGFTEPKPIQMQAIPPQLEGRDIFGIA
QTGSGKTAAFALPILSKIIALGTKRRAKTTRALILAPTRELAVQIEDTIKILAKGAHVST
ALVLGGVSRFSQVKKVAPGVDILIATPGRLTDLVREGDLILSDTKWLVLDEGDRMLDMGF
INDVKRIAKATAPDRQTALFSATMPDEIAELAKGLLKNPVRIEVSPQSTAAAEIVQGVVF
ARTKQKRQVLSTMLADEAMKSVIIFSRTKHGADRVTKDLERDGFKAAVIHGNKSQNARQK
ALNDFRDGSVRILVATDIAARGIDVPGISHVVNFDLPDEAESYVHRIGRTGRNGMDGIAI
TLCDPSENSKLRQVERIIRTKLPIVADHLGSPDPQRNPAEKNERFEPANDRNDRNGRRDG
RRPGGENKGNGFGKKRFGDKPAFAGERKPEGAKPFKGNNKRRFGGKRPAARAA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaacgaaaacacattgcccggcaacgataccgcggaactctccggtttcgcagcg
ctgggaatcacgggtgcgctgctcaaggccacccacaatgccggattcaccgaaccgaag
ccgatccagatgcaggcaatcccgccccagctggaaggccgtgacattttcggcatcgcg
cagacgggctccggcaagaccgcggcctttgcgctgcctatcctgtcgaagatcatcgcg
ctcggcaccaagcggcgcgccaagacgacccgcgcgctcatcctggcgccgacccgcgag
ctcgccgtgcagatcgaggacaccatcaagatcctcgccaagggcgcgcatgtctcgacg
gcactcgtgctgggcggcgtctcgcgcttcagccaggtgaagaaggttgctcccggcgtc
gacatcctcattgccacgcccggccgattgaccgacctggtgcgcgagggcgacctcatc
ctctccgacaccaaatggctggtgctggacgagggcgaccgcatgctcgacatgggcttc
atcaacgacgtcaagcgcatcgccaaggcgaccgcgcctgaccgccagacggcgctgttc
tcggccaccatgccggacgagatcgccgaactggccaagggtcttctgaagaacccggtc
cgtatcgaagtctcgccgcaaagcaccgcggccgccgagattgtccagggcgtcgtcttc
gcccgcaccaagcagaagcgccaggttctgtcgacgatgctcgctgacgaggcgatgaag
tccgtcatcatcttttcgcgcaccaagcatggcgccgaccgggtgaccaaggacctcgag
cgcgatggcttcaaggcggccgtcatccacggcaacaagtcgcagaatgcccgtcagaag
gcgctgaacgattttcgcgatggatcggtccgcattctggtcgcgaccgacatcgcggcg
cgcggcatcgacgtccccggcatcagccatgtcgtgaatttcgacctgccggatgaggcg
gaaagctacgtccaccgcatcggccgcaccggccgcaacggcatggacggcatcgcgatc
acgctttgcgatccttctgagaacagcaagctgcgccaggtcgagcgcatcatccgcacc
aaactgccgatcgtcgccgaccatctcggcagccccgatccgcagcgcaatccggctgaa
aagaacgagcgcttcgagcccgccaatgatcgcaacgaccgcaatggccgtcgtgacggc
cggcggccgggcggcgaaaacaagggcaacggctttggcaagaagcggttcggcgacaag
ccggcctttgccggtgagcgcaagccggaaggcgccaagcccttcaagggcaacaacaag
cgccgtttcggcggcaagcgtccggcagcgcgggctgcttaa
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