Mesorhizobium loti NZP2037: A9174_23680
Help
Entry
A9174_23680 CDS
T04711
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mln
Mesorhizobium loti NZP2037
Pathway
mln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A9174_23680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mln03021
]
A9174_23680
03400 DNA repair and recombination proteins [BR:
mln03400
]
A9174_23680
Enzymes [BR:
mln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A9174_23680
Transcription machinery [BR:
mln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A9174_23680
DNA repair and recombination proteins [BR:
mln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A9174_23680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Phage_cement_4
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ANN61661
LinkDB
All DBs
Position
complement(4919203..4923399)
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQLLSEEEYMIAVDEYGEDSFTA
MIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKYLKRLKVVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALE
TKAVTLHAKIKGRFRTVDAEGKVVSKIHDTTPGRMIIGELLPKNVNVPYETANQEMTKKN
ISKMIDTVYRHCGQKETVIFCDRIMALGFAHACRAGISFGKDDMLIPDSKIKLVSDTEAL
AKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEDNGRQKPMNSIYM
MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIVNSVDCGTDKGLTMQPIVDAGQVVASVGQRVLGRTA
LDDINHPVTGDLLVKAGTLMDERDVEQIEKAGVQSVRIRSALTCEVRVGVCAVCYGRDLA
RGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV
VRNSDGQQMVMGRNMAVLILDEAGKERATHRVTYGSRIFVDDGDKVKRGQRIAEWDPYTR
PILTEIEGKVAFEDLVDGISVQETADESTGITKREVIDWRSTPRGNDLKPAIVVQDAKGK
VGKLSKGGDARFLLSVEAILSVEPGAQVRPGDVLARIPMESAKTKDITGGLPRVAELFEA
RRPKDHAIIAEIDGTIRFGRDYKNKRRIIIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK
GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEI
TTQGDSTYIPGDHVDVIELEEVNERLIEDGKKPAEGQPVLLGITKASLQTPSFISAASFQ
ETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMSQIRRIATSRDELIIDERRKA
SGVEIAEPMLADMTTAAQ
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatctcttcaatccgcaggcgcctgcgcaggtgttcgattcc
atccggatctcactggccagccctgagaagattctgtcctggtcgttcggcgagatcaag
aagccggagaccatcaactaccgcaccttcaagccggagcgtgacggtctgttctgcgcg
cgcatttttggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaag
tacaagggcgtcatctgcgagaagtgcggcgtcgaagtcacgctgtcgcgcgtccgccgc
gagcgcatgggccatatcgagctcgccgctcccgtcgctcacatctggttcctgaagtcg
ctgccttcgcgcatcggcacgctgctcgacatgacgctgaaggatatcgagcgcgtcctc
tacttcgagaactacatcgtcaccgagcctggcctcaccgcgctgaaggagcaccagctg
ctcagcgaggaagagtacatgatcgccgtcgacgagtatggcgaggactccttcactgcc
atgatcggcgccgaggccattcatgaccttctggccggcatggatctggagaagatcgcc
ggcgacctgcgttcggagctggcttcgaccacgtccgagctgaagcagaagaagtatttg
aagcggctcaaggtcgtcgagaacttcatggaatccggcaaccgtccggaatggatgatc
atgaaggtggttccggttatcccgccggacctgcgcccgctggttccgctggatggggga
cgtttcgcgacgtctgacctgaacgatctctatcgccgcgtcatcaaccgcaacaaccgt
ctgaagcggctgatcgagctgcgcgctcctggcatcatcgtgcgcaatgaaaagcgcatg
ctgcaggaagccgtcgacgcactgttcgacaacggccgtcgcggccgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgctgtccgacatgttgaagggcaagcagggacggttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgctcggtcattgtcaccggt
ccggagctcaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaag
cccttcatctacgcccgtctcgacgccaagggttactcctcgaccgtcaagcaggccaag
aagctggtcgagaaggagcgtccggaagtctgggatattctcgacgaggtcatccgcgag
cacccggttctgttgaaccgtgcgccgacgctgcaccgcctcggcatccaggcgttcgag
ccgatcctgatcgaaggcaaggcgatccagctgcacccgctggtctgcacggccttcaac
gccgacttcgacggcgaccagatggcggtccacgtgccgctgtccctggaagcgcagctt
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcacccggcttccggcgctccg
atcatcgtgccgtcgcaggacatggttctgggtctctactatctctcgatcgtcaaccag
aacgagccgggcgagggcatggtgtttgccgacatgggcgaactccagcacgcgctcgag
accaaggcggtgaccctgcacgccaagatcaagggccgcttccgcacggtcgacgccgaa
ggcaaggtcgtgtcgaagatccatgacaccacgcctggccgtatgatcatcggcgagctt
ctgccgaagaacgtcaatgtgccgtacgagaccgccaaccaggagatgaccaagaagaac
atctccaagatgatcgacaccgtctaccgccattgcggtcagaaggagacggtcattttc
tgcgaccgcatcatggcgctcggcttcgctcacgcctgccgtgccggcatttcgttcggc
aaggacgacatgctgatcccggacagcaagatcaagctggtctccgacaccgaggctttg
gccaaggaatacgagcagcagtacaatgacggcctgatcacgcagggcgagaagtacaac
aaggttgtcgacgcctgggccaagtgctccgaaaaggtcgccgacgagatgatggcccgc
atcaaggcggtggagttcgaagacaacggccgtcagaagccgatgaactcgatctacatg
atgtcgcactccggtgcgcgtggctcgcccacccagatgcgtcagctcgccggcatgcgc
ggcctgatggccaagccgtcgggtgaaatcatcgagacgccgatcatctcgaacttcaag
gaaggcctgaccgtgctcgagtacttcaactcgacccacggcgcccgcaagggtctggcc
gacaccgccttgaagacggcgaactcgggttacctcacccgtcgtctggtcgacgtggcg
caggactgcatcgtcaactccgtggattgcggcaccgacaagggcctcaccatgcagccg
atcgtcgatgccggtcaggtcgtcgcttcggtcggccagcgcgtgctgggccgcaccgcg
ctcgatgacatcaaccatccggtgaccggtgacctgctggtcaaggccggaacgctgatg
gacgagcgtgacgtggagcagatcgaaaaggccggcgtccagtcggtccgcatccgctcg
gcactgacctgcgaggtcagggtcggcgtgtgcgcggtctgctacggacgcgatctggcg
cgcggcaccccggtcaaccagggtgaagccgtcggcgtcatcgccgcgcagtcgatcggc
gagccgggcacccagctcaccatgcgtaccttccacatgggcggtaccgcgcaggtggtg
gatagttcgttccttgaagcctcctatgagggcaaggtcgaaatccgcaaccgcaacgtg
gtgcgcaactccgacggccagcagatggtcatgggccgcaacatggcggtgctgatcctc
gacgaggccggcaaggagcgtgccacgcaccgtgtcacctatggttcgcgtatcttcgtg
gacgatggcgacaaggtgaagcgcggccagcgtatcgccgagtgggatccctacacccgc
ccgatcctcaccgaaatcgagggcaaggtggcgttcgaggatctggtcgacggcatttcc
gtccaggaaacggccgacgagtcgaccggcatcaccaagcgtgaggtcatcgactggcgt
tcgacgccgcgcggcaacgatctgaagccggcgatcgtcgttcaggacgccaagggcaag
gtcggcaagctgtcgaagggtggcgatgcccgcttcctgctctcggtcgaggccattctc
tcggtcgagccaggtgcgcaggttcgtcccggcgacgtgctggcgcgtattccgatggaa
agcgccaagaccaaggacatcaccggcggtctgccgcgtgttgccgaactgttcgaggcc
cgtcgtccgaaggatcacgccatcatcgccgagatagatggcacgatccgcttcggccgc
gactacaagaacaagcgccgcatcatcatcgagccgcatgactcgacgctcgagccggtc
gaatacctgatcccgaagggcaagccgttccacctccaggacggcgacgtcatcgagaag
ggcgactacatcctcgacggcaatccggcgccgcacgacatcctggcgatcaagggcgtg
gaggcacttgcttcctacctcgtcaacgaaatccaggaagtttaccgcctgcagggcgtg
tcgatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgagatc
accacgcagggcgactcgacctacattccgggcgaccacgtcgacgtgatcgaactggaa
gaggtcaacgagcgcctgatcgaggacggcaagaagccggccgaaggtcagccggtgctg
ctcggcatcaccaaggcctcgctgcagacgccgtccttcatctcggccgcctccttccag
gagacgaccagggtgctgacggaggccgcggttgccggcaagaccgacatgctgcagggc
ttgaaggaaaacgtcatcgtcggccggctgatcccggccggtacgggcggcacgatgagc
cagatccggcgcatcgccacctcgcgcgacgaactcatcatcgacgagcgccgcaaggcc
tccggtgtggaaatcgccgagccgatgctggccgatatgacaaccgccgcgcagtaa
DBGET
integrated database retrieval system
