Mesorhizobium japonicum MAFF 303099: mll0870
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Entry
mll0870 CDS
T00043
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mlo
Mesorhizobium japonicum MAFF 303099
Pathway
mlo03030
DNA replication
mlo03430
Mismatch repair
mlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
mll0870
03430 Mismatch repair
mll0870
03440 Homologous recombination
mll0870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlo03032
]
mll0870
03400 DNA repair and recombination proteins [BR:
mlo03400
]
mll0870
Enzymes [BR:
mlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
mll0870
DNA replication proteins [BR:
mlo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
mll0870
DNA repair and recombination proteins [BR:
mlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
mll0870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
BAB48366
UniProt:
Q98LU7
LinkDB
All DBs
Position
complement(695575..699102)
Genome browser
AA seq
1175 aa
AA seq
DB search
MADDRLPRDPLKREAAIAAARPEVPARPFVHLRVHSAYSLLEGALQLGKIVGHAVKDEAP
AIAVTDTNNLFGALEFAQKAVKDGIQPIIGCQIALAFSGENSDGQRDRRRQGPEMRPVVL
LAATEAGYSNLVRLVSRVYLETPPGEAVHLTTEMLEGKADGLICLSGGPRGPIGNALKED
RRDLAEVRLLTLKTLFGDRLYVELDRVAGYDRVIEHQTIDLAYAHELPLVATNEAFFSSR
DDYEAHDALIAIAEGSVVAVDTRRRLSPDNFLRSQAEMAQLFADLPEAIDNTVEIALRCS
YYPKTRSPILPRFTGGDASDKDAAEKAEAAELARQAREGLDARLALHGPTPGYTVEQYRE
RLEFELGIIEKMKFPGYFLIVADFIKWAKAQGIPVGPGRGSGAGSLVAYSTTITDIDPLR
FSLLFERFLNPDRVSMPDFDIDFCQDRREEVIRYVQQKYGRDQVGQIITFGTLQARAVLR
DVGRVLQMPYGQVDKLSKMVPQNPANPVKLADAIANEPRFAEEAEKEPIVQTLLDMAQKL
EGLYRHASTHAAGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKT
LTVLETAVKLIRRRGIDIDLATIPLDDPETYAMLSRGEVVGVFQVESAGMRKALIGMRPD
CIEDIIALVALYRPGPMENIPTYNARKHGEEEMASIHPKIDHLVKETQGVIVYQEQVMQI
AQELSGYSLGEADLLRRAMGKKIRAEMDKQRERFVSGAVERGVSKPQADFIFDLLAKFAD
YGFNKSHAAAYAVVSYQTAYLKAHYPVEFLAASMTLDMGNTDKLADFRQDALRLGIEVLA
PSVMTSFRPFEVGENRIYYSMAALKGVGDAAVEHIVAVRGEKPFKNLADFCERVDPKIVG
KRVFESLIMAGALDCFGHDRAQMMAGVERMMGLASLAQQNAVSGQADIFGASLGAQSQAL
NLPATDPWLAADRLHREFQVVGFYLSAHPLDEYKAALQKMRVQNWAEFSAAVKRGASAGR
LAGTVTSKQERKTRTGNKMGVVAFSDTSGQYEAVLFSEALAQYRDLLEAGRSVVITVAAE
DRPEGVNLRINSVQSLEEEASRIQKALRIFVRNEGPASIIQSQLTQRGESQVSIIVIKEE
AQGEVEIALQGGYRVSPQIASAMRAVPGVVEVELV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacagacttccacgcgatcccctgaagcgcgaagccgcgattgcggcggcg
cgtccggaggtgccggcgcggccgttcgtgcatctgcgcgtgcattcggcctattcgctg
ctcgagggcgcgcttcagcttggcaagatcgtcggccacgcggtgaaagacgaagcgccg
gcgattgccgtcaccgacaccaacaatctgttcggcgcgctcgaattcgcgcagaaggcg
gtcaaggacggcatccagccgatcatcggctgccagatcgcgctcgccttttccggcgaa
aacagcgacggccagcgcgaccgccgccggcaaggcccggaaatgcggccggtcgttctg
ctcgccgcgaccgaagccggctattccaacctggtcaggctggtcagccgcgtctatctg
gaaacgccgcccggcgaggcggtgcatctgacaaccgagatgctggaggggaaggccgat
gggctgatctgcctcagcggcgggccacgcggcccgatcggcaacgccttgaaggaggat
cgccgcgatctggccgaggtgcggcttttgacgctgaaaacgctgttcggcgaccggctc
tatgtcgaattggaccgggtcgcgggctacgaccgggtcatcgagcatcagacgatcgat
ctcgcctatgcgcacgaacttccgcttgtcgccaccaacgaagccttcttctcgtcgcgc
gacgattatgaggcgcatgacgcgctgatcgccattgccgagggctccgtcgtcgccgtc
gacactcgccgccggctgtcgccggacaatttcctgcgcagccaggccgaaatggcgcaa
ttgttcgccgacctgccggaagcgatcgacaacacggtcgaaatcgcgctgcgctgttcc
tattatccaaaaacccgcagcccgatcctgccgcgcttcaccggcggagatgcctccgac
aaggatgcggccgaaaaggccgaggcggcggaactcgcacgccaggcgcgcgaggggctc
gacgcgcggcttgcgctgcacgggccaacgccgggctacacggtcgagcaatatcgggag
cggctcgaattcgagctcggcatcatcgagaagatgaaatttccgggctacttcctgatc
gttgccgacttcatcaaatgggccaaggcgcaaggcattccggtcggaccgggccgtggt
tcgggcgccgggtcgctggtcgcctattcgacgaccatcaccgacatcgatccgctgcgc
ttctcgctgctgttcgagcgcttcctcaatcccgaccgcgtgtcgatgcccgacttcgac
atcgacttctgccaggatcgccgcgaagaggtgatccgctacgtccagcagaaatacggc
cgcgaccaggtcggccagatcatcaccttcggtacgctgcaggcccgcgccgtgctgcgc
gacgtcggccgcgtactgcagatgccctacggccaggtcgacaagctgtccaagatggtg
ccgcagaacccggcaaatccggtcaagctcgcggacgccatcgccaacgagccgcgcttt
gccgaagaggccgagaaggagccgatcgtccagacgctgctcgacatggcgcagaagctg
gaaggcctctatcgccatgcctcgacgcacgccgccggcatcgtcatcggcgaccggcct
ttgtcggaactggtgccgatgtaccgcgatccgcgctcggacatgccggtcacccagttc
aacatgaaatatgtcgagcaggccgggctggtgaagttcgacttcctcggcctgaagacg
ctgaccgtgctggagacggcggtcaagctgatccgccggcgtggcatcgacatcgacctg
gcgacgatcccgctcgacgaccccgaaacttacgccatgctgtcgcgcggcgaggtggtc
ggcgtgttccaggtggaaagtgccggcatgcgcaaggcgctgatcggcatgcggcccgac
tgcatcgaggacatcatcgcgctcgtcgccctctaccggccgggcccgatggagaacatc
ccgacctacaacgccagaaagcatggcgaggaggagatggcctcgatccatcccaagatc
gaccatctggtgaaggagacgcaaggcgttatcgtttaccaggaacaggtgatgcagatc
gcgcaggagctgtccggctattcgctcggcgaggccgaccttctgcgccgcgccatgggc
aagaagatccgcgccgagatggacaagcagcgcgagcgctttgtctcgggtgcggtcgag
cgcggtgtcagcaagccgcaagccgacttcattttcgacctgctggccaaattcgccgac
tatggcttcaacaagtcgcacgccgccgcctacgccgtggtctcgtaccagaccgcctat
ctcaaggctcactacccggtcgagttcctggcggcgtcgatgaccctcgacatgggaaat
accgacaagcttgccgacttccgccaggacgcgctgcgccttggcatcgaggttctggcg
ccatcggtgatgaccagcttccgacccttcgaggtcggcgagaaccgcatctattattcg
atggccgcgctcaagggcgtcggcgacgcggcggtcgagcacatcgttgccgtgcgcggc
gaaaagccgttcaagaatcttgccgatttctgcgagcgggtcgaccccaagatcgtcggc
aagcgcgtcttcgaaagcctgatcatggccggtgcgctcgactgcttcggccacgaccgc
gcccagatgatggctggcgtcgaacggatgatggggctggcgtcgctcgcccagcagaat
gctgtttccggccaggccgatattttcggcgcctcgctgggcgctcagtcgcaggcgctg
aacctgccggcgacagatccatggctcgccgccgaccggctgcaccgcgaattccaggtc
gtcggcttctatctctcggcccatccgctcgacgaatacaaggcggccttgcagaagatg
cgggtgcagaactgggcggagttttcggccgccgtcaaacgcggcgcttctgccggccgc
ctcgccggcacggtgaccagcaagcaggagcgcaagacgcgcaccggcaacaagatgggc
gtggtggccttttccgatacttccggccagtacgaggccgtgctgttttcagaagcgttg
gcgcagtatcgtgacctgctggaagccggccgctccgtcgtcatcaccgtcgcggcggag
gacaggcccgagggtgtcaatttacggatcaactcggtgcagtcgctggaggaggaggca
agccgcatccagaaagcgctgcgcattttcgtcaggaacgagggacccgcctcgataatc
caatcccagctcacccagcgcggtgaaagtcaggtgagcatcatcgttataaaggaagag
gcccagggcgaggtcgagatcgccttgcaaggcggctaccgcgtttcgccgcagatcgcc
tcggcgatgcgcgcggtacccggcgtggtcgaagtggaactggtgtga
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