Mesorhizobium japonicum MAFF 303099: mll0927
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Entry
mll0927 CDS
T00043
Name
(GenBank) single-strand DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mlo
Mesorhizobium japonicum MAFF 303099
Pathway
mlo03410
Base excision repair
mlo03430
Mismatch repair
mlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
mll0927
03430 Mismatch repair
mll0927
03440 Homologous recombination
mll0927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlo03400
]
mll0927
DNA repair and recombination proteins [BR:
mlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
mll0927
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
mll0927
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
mll0927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
CDC45
Motif
Other DBs
NCBI-ProteinID:
BAB48411
UniProt:
Q98LQ2
LinkDB
All DBs
Position
complement(747793..749571)
Genome browser
AA seq
592 aa
AA seq
DB search
MGDRRLFLDIRQSATGLSWEHRLTERQDMVALAIAQGHGVPDIVARVLAGRGVTADETER
FLEPTIRDLLPNPASLTDMDKAATRIAAAVMAREKVAIFGDYDVDGAASSALLKRFLAHF
SIPSEIYIPDRIFEGYGPNPDAMRELVSRGATLIVTVDCGTNSAISVDAANEAGADVVVL
DHHQVGGALPAAIAVVNPNRDDDLSGQGHLCAAGVVFLALVQTAKILRGLSDVAPPDLLS
LLDLVALATVCDVVPLTGVNRAFVVKGLQMARQQKNEGLAALARVSRIGEPISTFHLAYL
IGPRINAGGRIGDAALGSRLLATDDPVEARTIAETLDRLNQERQLMEQEMLAAARAEADA
ELAGGSGPAIVVTASNNWHPGIVGLLASRLKDHARRPAFAIAFNAVGIGTGSGRSVSGFD
LGRLVREAADAGLIVKGGGHGMAAGITVERARLGELRAFFEERAAADVFRLQDEESLAID
GALAAEGATLSLLDALEKAGPFGAGHVAPVFVLPRHRLADARPVGTNHIRCELQSDAGGR
IPAIAFRAVDTVLGEFLFKNRGKSVHVAGSLSGNYWNGNRTVQFRIVDAARS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaggcgcctcttcctcgatatcaggcagtcggcgaccggtctctcctgggag
caccggctgaccgaacggcaggacatggtcgcgcttgccatcgcgcagggccatggcgtg
cccgacatcgtcgcgcgcgttctggccggacgcggggttaccgccgacgagaccgagcgc
ttcctcgagccgacaatccgcgacctgttgcccaatccggcttcgctgaccgacatggac
aaggccgccacccgcatcgccgcggcggtgatggcgcgggaaaaagtggcgatcttcggc
gactacgatgtcgacggcgccgcctcgtcggccttgctgaaacggttcctggcgcatttc
tccataccgtcggaaatctatattccggaccgtatcttcgagggttacggtcccaatccc
gatgccatgcgcgaactcgtctcgcgcggcgcgacgctgatcgtcaccgtcgattgcggc
accaacagtgccatttccgtagatgccgccaatgaagccggcgccgatgtcgtggtgctc
gaccaccatcaggtcggcggcgccttgccggcggcgattgccgtcgtcaatccaaaccgt
gacgacgatctttcggggcagggccatctctgcgccgccggtgtcgtctttcttgccttg
gtgcagaccgcgaaaatcctgcgtggcctgagcgatgtcgcgccgcccgacctgctgtca
ctgctcgatctcgttgcgttggcgaccgtttgcgatgtggtgccgctcaccggcgtcaac
cgcgccttcgtcgtcaaagggctgcagatggcgcgccagcagaagaatgaaggcctggcc
gcattggcgcgagtgtcgcgcattggcgaaccgatcagcacgttccatctcgcctatctg
atcgggccgcgcatcaacgccggcggccgcatcggcgatgcagcacttggcagccggctg
cttgcgacggacgatccggtcgaggcgcggaccattgccgagacgctcgaccggctgaac
caggagcggcagctgatggagcaggagatgctggccgcggcgcgtgccgaggccgatgcc
gagcttgcgggcggcagcggcccggcgatcgtcgtcaccgccagcaacaattggcatccc
ggcattgtcggcctgcttgcctcgaggctgaaggatcatgcgcgccgcccggctttcgcc
attgccttcaacgccgtgggcatcggtaccggttcgggccgctcggtgtcgggcttcgat
ctcggccggctggtgcgcgaagccgccgacgccgggctgatcgtcaagggtggcggtcat
ggcatggcggccggcatcaccgtggagcgcgccaggctgggcgaactcagggcgttcttc
gaggaacgggcggctgccgacgtgtttcggctgcaggacgaggagagcctggcgatcgac
ggcgcgcttgccgccgaaggcgcgacgctcagcctgctcgacgcgctggaaaaggccggc
ccgtttggcgccggccacgtcgcgccggtcttcgtgctgccgcgccatcggctggccgac
gcccggccggtcggcaccaatcatatacgctgcgaattgcagtcggacgccggcggccgc
atccccgcgatcgcctttcgggccgtcgatacggtgcttggcgaattcctgttcaagaac
cggggcaagagcgtgcatgtcgccggctcgctgtcgggcaattactggaacggcaaccgc
acggtgcaattccgtatcgtcgatgcggcgcggtcgtag
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