Mesorhizobium japonicum MAFF 303099: mll3196
Help
Entry
mll3196 CDS
T00043
Name
(GenBank) sigma factor (54); RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
mlo
Mesorhizobium japonicum MAFF 303099
Pathway
mlo02020
Two-component system
mlo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
mll3196
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
mll3196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlo03021
]
mll3196
Transcription machinery [BR:
mlo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mll3196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_IclR
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
BAB50141
UniProt:
Q98GS5
LinkDB
All DBs
Position
complement(2557212..2558738)
Genome browser
AA seq
508 aa
AA seq
DB search
MALAAKLQLRQSQSLVMTPQLMQSIRLLQFTHVELEHFIDEEIERNPLLERAEPQDDAAS
DQVQKIDAEPQAAAEGDWFENEAGWSAEAISEKLDTSLENLFPDDPGTSERLGPDLTAQW
KSASGNGGGSSSEGLDAGDMAASAITLRDHVGEQIALAFVDPAARLIAGELADGLDETGY
VRADLEEVATRLGTDTASVAEVLAVCQTFEPTGLFARDLAESLSLQLAARDRLDPAMKAL
VANLELLARRDFQTLKRICGVDEEDLLDMLAEIRALDPRPGMAFSGGASDAIVADVEVRA
ANDGSWTVELNAETLPRVLVDHIYFAQVSPHAKNQAEKDFLAECLQNANWLTRSLDQRAK
TILKVASEIVRQQDAFLVHGVRQLKPLNLRTVADAIGMHESTVSRVTANKYMLTPRGVFE
LRYFFTASIAASGGGDAHSSEAVRDRIKQLIDEEKPVDVLSDDAIVDMLKESGVDIARRT
VAKYREGMNIPSSVQRRREKRALASAGR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggcggcgaaactacagctcagacagtcgcagtcgctggtgatgacgccgcag
ctgatgcagtcgattcggctgctgcagttcacccatgtcgagcttgagcacttcatcgac
gaggagatcgagcgcaacccgcttttggagcgcgccgagccgcaggacgacgccgcgagc
gaccaggtgcagaagatcgatgccgagccgcaagccgccgccgagggcgactggttcgag
aacgaggcggggtggagcgccgaggcgatctcggaaaaactcgacacttcgctggagaac
ctgtttcccgacgatcccggcaccagcgagcggctcggacccgacctgactgcgcaatgg
aaatcggcttccggcaatggcggcggctcctcgtccgaggggctcgacgccggtgacatg
gcggcgagcgccatcactttgcgcgaccatgtcggcgagcagatcgcgctcgccttcgtc
gatcccgcggcgcggctgatcgcaggcgaactcgccgatggcttggacgagactggctat
gtcagggccgatctcgaggaggtcgccacgcgtctgggcaccgatacagcgagcgtggcc
gaggtgctggcggtgtgccagacttttgaaccgaccggcctgttcgcccgcgaccttgca
gaatctctttcgctgcagcttgccgcgcgcgaccgtctcgacccggcgatgaaagccctg
gtcgccaatctcgagcttttggcgcggcgtgatttccagacgctgaagcggatctgcggc
gtcgacgaggaggatctactcgacatgctggcggagatccgggcactcgatccgcgcccg
ggcatggcgttttcgggcggcgccagcgacgccatcgtcgccgatgtcgaggtgcgcgcg
gccaatgacggcagctggaccgtcgaactcaatgccgaaacgctgccgcgcgtgctggtc
gaccatatctatttcgcccaggtgtcgccgcatgcgaagaaccaggcggaaaaggatttc
ctggccgaatgcctgcagaacgccaactggctgacgcgaagcctcgaccagcgggcaaag
acgatcctcaaagtggcctcggaaatcgtgcgccagcaggatgcgttcctggtccatggt
gtgcgccagctgaagccgctcaatttgcgcacggtggccgacgccatcggcatgcacgaa
tcgaccgtcagccgcgtcaccgccaacaaatacatgctgaccccgcgcggcgtgttcgaa
ctgcgctatttcttcaccgcctcgatcgccgcgtcgggcggcggcgacgcgcattcctcg
gaagcggtgcgtgaccgcatcaagcagctgatcgacgaggagaaacccgtcgatgtactt
tcggatgacgcgatcgtcgacatgctcaaggaaagcggtgtcgatatcgcccggcgcacg
gtcgccaagtaccgggaaggcatgaatattccgtcgtcggtgcagcgccggcgcgagaag
cgggcgctcgccagcgccgggcgctaa
DBGET
integrated database retrieval system
