Mesorhizobium japonicum MAFF 303099: mll4071
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Entry
mll4071 CDS
T00043
Name
(GenBank) primosomal replication factor Y; primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mlo
Mesorhizobium japonicum MAFF 303099
Pathway
mlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
mll4071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlo03400
]
mll4071
Enzymes [BR:
mlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
mll4071
DNA repair and recombination proteins [BR:
mlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
mll4071
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
Zn_ribbon_3
Zn_ribbon_Com
zf-UDP
Motif
Other DBs
NCBI-ProteinID:
BAB50816
LinkDB
All DBs
Position
complement(3251672..3253855)
Genome browser
AA seq
727 aa
AA seq
DB search
MIEDSPFVAAAPVLVPMPAERPYTYAVPAGMRVVPGSIVRVPLGPRQVAGIVWDGAVETV
DAKKLRSIEQVFDCPPIDRSMRRFVDWVAQYTLSAPGMVARMLLRAPEAFDPEPWIEGLQ
RTLIIPDRMTDARARVLETAEGGLAWTRSGLAHAAGVSSTVIEGLKAQGVFETVMIPPRP
VVAAPDPSYAVPELMPDQSDAASMLRANVAAGAFNVALLDGVTGSGKTEVYFEAVAAALD
QGKQVLILLPEIALTHAFLERFQQRFGAKPGEWHSDLPPRMREKVWRQVAEGTVRVVAGA
RSALFLPFKELGLIVVDEEHDPAYKQEDRVFYNARDMAVVRGHIGGFPVVLASATPSVES
RVNASQGKYNRAILSARFAEAALPQLKSIDMRRAPPARGGFLSPVLIDHMRKTLEKKEQS
LLFLNRRGYAPLTLCRVCGHRFGCPVCSAWLVEHRFRGQLVCHHCGHNERRPEACPECGT
LDHLVACGPGVERIAEEVVTHFPDARTIVLSSDLMGGVRRLRLELEAIADGEADIVIGTQ
LVAKGHNFPNMTLVGVVDADLGLANGDPRAAERTFQLLSQVTGRAGRTGKKSLGLLQTFQ
PDHPVMRAIVSGDAEAFYEREIAERERAALPPFGRLAGVIVSAVTRAEAEGHARGLRRAA
PEASDLFVLGPAEAPLSLLGGRHRFRLLIQGERRADMQGFIRAMLANGPKQRGSVRVQVD
IDPQSFL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagattcgccctttgtcgcagccgcgccggttctggtgccgatgcctgccgaa
cgcccttacacctatgccgtgccggccggcatgcgcgtcgtgccggggtcaatcgtgcgc
gtgccgctcgggccgcgccaggtcgccgggatcgtctgggacggcgcggtcgagactgtc
gatgcgaaaaagctgcgctcgatcgaacaggttttcgactgcccgccgatcgaccgttcg
atgcgccgtttcgtcgactgggtggcgcaatacacgctgtcggcgcccggcatggtggcg
cgcatgctgctcagagcgccggaggcgttcgacccggaaccctggatcgaggggctgcag
cgcacgcttatcattcccgaccggatgacggatgcgcgggcgcgtgtgctggagacggcc
gaaggtgggttggcctggacgcgatcgggccttgcccatgcggccggtgtgtcgtcgacg
gtgatcgaggggctgaaggcgcaaggcgtgttcgagacggtgatgatcccgccgcgcccg
gtggtggcagcacctgacccgagctatgcggtgcccgagctgatgccggaccagagcgac
gccgcatcgatgctgcgcgccaatgtcgcggccggcgccttcaatgtcgcgctgctcgat
ggcgtcaccgggtccggcaagacggaggtgtatttcgaggcggtggcggccgcgctcgac
cagggcaagcaggtgctgatccttttgccggaaatcgcgttgacccacgctttcctcgaa
cgcttccagcagcgcttcggcgccaagccgggcgaatggcattccgacctgccgcccagg
atgcgcgaaaaagtctggcggcaagtggctgagggcacggtgcgcgtcgttgccggtgcg
cgctcggcgctgttcctgccgttcaaggagcttggcctgatcgtcgtcgatgaggagcac
gaccccgcctacaagcaggaggaccgtgtcttctacaatgcgcgcgacatggcggtggtg
cgcggccatatcggtggcttcccggtggtgctggcgtcggcgacgccatcggtcgaaagc
cgggtcaatgcgagccaaggcaagtacaacagggccatcctttccgcccgcttcgccgag
gcggcgctgccgcagctgaagtcgatcgacatgcgacgcgcgccaccggcgcgtggtggc
ttcctgtcgcccgtgctgatcgaccatatgcgcaagacgctggagaagaaggaacagtcg
ctcctgttcctcaaccggcgcggctatgcgccgctgacgctgtgccgcgtctgcggccac
cgtttcggctgcccggtctgttcggcctggctggtcgagcatcgctttcgcggccagctg
gtctgccatcattgcgggcacaatgagcgccgccccgaagcctgccctgaatgcggcacg
ctcgatcatctggtcgcctgcggcccgggcgtcgagcgcatcgccgaggaggtcgtcacg
catttccccgatgcgcgcaccatcgtcttgtcatccgacctgatgggcggggtgcggcgg
ctgcggctggaactggaggcgatcgccgatggcgaagccgatatcgtcatcggcacgcag
ctcgtcgccaagggccacaattttcccaacatgacgctggtcggcgtcgtcgatgccgat
ctcggcctcgccaatggcgatccgcgggccgccgagcgcaccttccaactgctcagccag
gtgaccggccgcgcaggccgcaccggcaagaagagcctcggcctgctgcagacgttccag
cccgaccatccggtgatgcgggcgatcgtctcgggcgatgccgaggctttttacgaacga
gagatcgccgagcgcgaacgggcggccctaccgccgttcggccggttggccggcgtcatc
gtaagcgcggtgacgcgggcggaagcggaaggtcatgcacggggcctgcgccgcgcggcg
ccggaggcctcggacctgttcgtgctgggtccggccgaggcgccgctgtccctgctcggc
ggccgccatcgcttccgcctgctgatccagggcgaacggcgcgcagacatgcaagggttt
atccgcgccatgctggccaatgggccgaagcagcgcggttcggtccgggtgcaggtcgat
atcgacccgcagagctttttgtaa
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