Mesorhizobium japonicum MAFF 303099: mll4485
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Entry
mll4485 CDS
T00043
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mlo
Mesorhizobium japonicum MAFF 303099
Pathway
mlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
mll4485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlo03021
]
mll4485
03019 Messenger RNA biogenesis [BR:
mlo03019
]
mll4485
Transcription machinery [BR:
mlo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
mll4485
Messenger RNA biogenesis [BR:
mlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
mll4485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
S1CSD-TOTE-2
NACHT
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
BAB51132
UniProt:
Q98DY8
LinkDB
All DBs
Position
complement(3569578..3570834)
Genome browser
AA seq
418 aa
AA seq
DB search
MKLTEFKNKKPPELIAYAESLEVENASVMRKQELMFAILKKLAAQDVEIIGDGVVEVLQD
GFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVNTIN
FDDPEKIRHKIHFDNLTPLYPTSRLKMEMEVPTSKDISPRVIDLVAPLGKGQRALIVAQP
RTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAVRHV
QVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIYPAMDI
LKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNADFFDSMNT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaccgaattcaagaacaagaaaccgccagagctgatcgcttatgccgaatcg
ctcgaggtcgagaacgccagcgtcatgcgcaagcaggaactgatgttcgcgatcctgaag
aagctggccgcccaggacgtcgagatcatcggcgacggcgtggtcgaggtgcttcaggac
ggtttcggcttcctgcgctcggccaacgccaactatctgccaggccccgacgacatctat
atctcgccgtcgcagatccggcgcttttcgctgaagaccggcgatacggtcgaaggaccg
atccgcagcccgaaagagggcgagcgctatttcgcgctgctcaaggtcaacaccatcaat
ttcgacgaccccgaaaagatccgccacaagatccatttcgacaatctgacgccgctctat
ccgacttcgcggctgaagatggaaatggaggttccgacctccaaggatatctcgccgcgc
gtcatcgacctggtggcgccgctcggcaagggccagcgcgctttgattgtcgcgcagccg
cgcaccggtaagacggtgctgctgcagaacatcgcccactccatcaccaccaatcacccg
gaatgctatctgatcgtgcttctgatcgacgagcggccggaagaagtgaccgacatgcag
cgctcggtgaagggcgaggtcgtctcctcgaccttcgacgaaccggcggtgcgccacgtc
caggtcgccgaaatggtcatcgaaaaggccaagcgcctggtcgaacatggccgcgacgtc
gtcatcctgctcgattccatcacccgcctcggccgcgcctacaacaccgtcgtgccgtca
tccggcaaggtgctgaccggcggtgtcgacgccaacgcgctgcagcgcccgaagcgcttc
ttcggtgccgcgcgtaacatcgaggaaggcggctcgctgaccatcatcgccaccgcgctg
atcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggcaccggcaat
tcggaaatcgtgctcgaccgcaaggtcgccgacaagcgcatctatccggccatggacatc
ctcaaatccggcacccgcaaggaagacctgctggtgccgcgtcaggatctgcagaagatc
ttcgtgctgcgccgcatcctggcgccgatgggaaccaccgacgcgatcgagttcctcatc
gacaagctgaagcagaccaagaccaatgcggacttcttcgattcgatgaatacgtaa
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