Mesorhizobium japonicum MAFF 303099: mll8354
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Entry
mll8354 CDS
T00043
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mlo
Mesorhizobium japonicum MAFF 303099
Brite
KEGG Orthology (KO) [BR:
mlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlo03016
]
mll8354
Enzymes [BR:
mlo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
mll8354
Transfer RNA biogenesis [BR:
mlo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
mll8354
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
BAB53929
UniProt:
Q983F2
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All DBs
Position
complement(6864634..6865785)
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AA seq
383 aa
AA seq
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MHVITTQKELETVLAAFEKSDFVTVDTEFIRETTFWPILCLIQMAAPGVTALIDPLSPDI
NLAPFFRLMANEAVVKVFHAARQDIEIIVHLGDLVPHPVFDTQVAAMVCGFGDSVSYDQL
VQRITGARLDKSSRFTDWRHRPLSDKQLDYALADVTHLIEVYQHLSAELARENRAHWLNE
EMDVLTSRETYDPHPEDAWKRLKMRLRKPQELAIVQAVAAWREREARERDVPRGRVLKDD
AIYEVAQQAPRDAAALAKLRTTPKGWERSSTATALLGAVNTALALPKEQMPKLPKNFQPP
EGSSAAAELLKVLLRIVAEKQGVASKVLASSDDIDRIAAEGEDADVPALQGWRRAVFGEA
ALKLVRGEIGIKFDKRKIAVFDL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcatcaccacccagaaagaactcgagaccgttctcgccgctttcgaaaagtcg
gacttcgtcaccgtcgacaccgaattcatccgcgaaacgaccttctggccgatcttgtgc
ctgatccagatggcggcgcctggggtcaccgcgctgatcgacccgctgtcgcccgacatc
aacctcgccccgttcttccggctgatggccaacgaggccgtggtcaaggtcttccacgcg
gcgcgccaggacatcgaaattatagtccatctcggcgatctcgtgccgcacccggtgttc
gacacgcaggtcgcggccatggtctgcggcttcggcgacagcgtttcctacgaccagctc
gtgcagcgcatcaccggcgcgcggctcgacaagtcgtcgcgcttcaccgactggcgccac
cggccgctgtccgacaagcagctcgactatgcgctcgccgacgtcacccatctgatcgag
gtctatcagcatttgagcgccgaactggcgcgggagaaccgcgcccactggctgaacgaa
gagatggacgtgctgacctcgcgcgagacctacgatccgcatcccgaggacgcctggaag
cggctgaagatgcggctgcgcaagccgcaggaactggcgatcgtgcaggccgtggcggca
tggcgcgagcgcgaggcgcgcgagcgggacgtgccgcgcggccgcgtgctcaaggacgac
gcgatctacgaggtggcacagcaggcgccacgcgacgcggccgcccttgccaagctgcgc
accacgcccaagggctgggaacgctcctcgacggcgacggccctgcttggcgcggtcaac
accgcgctggccttgcccaaggagcagatgccgaaactgccgaagaatttccagccgccg
gaaggctcgagcgccgcggcggaactgttgaaagtgctgctcaggattgtcgccgaaaag
cagggtgtggcctcgaaagtgctggcctccagcgacgacatcgaccgcatcgcggccgag
ggcgaggatgccgacgtgccggcgctgcagggttggcggcgcgccgtcttcggcgaagcg
gcactgaagctggtgcgcggcgagatcggcataaagttcgacaagcgtaaaatagcggtg
ttcgacctctag
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