Mesorhizobium japonicum MAFF 303099: mlr0325
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Entry
mlr0325 CDS
T00043
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mlo
Mesorhizobium japonicum MAFF 303099
Pathway
mlo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mlo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
mlr0325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlo03021
]
mlr0325
03400 DNA repair and recombination proteins [BR:
mlo03400
]
mlr0325
Enzymes [BR:
mlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
mlr0325
Transcription machinery [BR:
mlo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
mlr0325
DNA repair and recombination proteins [BR:
mlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
mlr0325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
BAB47930
UniProt:
Q98N33
LinkDB
All DBs
Position
222276..223286
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AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKIEFSSKKKTLTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIAGVREDVTDIVLNIKEIAIRMEGDGPKRMVVRKQGPGAVLAGDIQTVG
DVEILNPDHVICTLDEGAEIRMEFTVDTGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMTIETDGSISGEDAVAFAARILQDQLGLFVNFDEPQKEVAA
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLAAMGLHLGMEVPDWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaattggcaggaactgatcaagccgaacaagatcgagttctcgtcgaag
aagaagacgctgaccacgctggtcgccgagccgctcgagcgtggctttggcctcaccctc
ggcaacgcgctgcgccgcgtgcttctgtcttcgctgcgcggtgcggctgtgaccgctgtg
cagatcgacggcgttctgcatgaattctcgtctatcgccggcgtgcgcgaggacgtgacc
gacatcgtcttgaacatcaaggagatcgccatccgcatggaaggcgatggccccaagcgc
atggtcgtgcgcaagcagggaccgggtgcggttctcgccggcgacatccagacggttggt
gacgttgagatcctcaaccccgaccacgtcatctgcacgctggacgaaggcgctgaaatc
cgcatggaattcaccgtcgacaccggcaagggttacgtgccggccgagcgcaaccgcgcc
gaggacgcgccgattggcctgatcccggtcgacagcctctattcgcccgtcaagaaggtc
tcctacaaggtcgaaaacacccgcgagggccaggttctcgactatgacaagctgaccatg
acgatcgagaccgacggttcgatctcgggcgaggacgcagtggccttcgccgcccgcatc
ctgcaggaccagctcggcctgttcgtcaacttcgacgagccgcagaaggaagtcgccgcc
gaagccgtcaccgagctcgccttcaacccggcgctgctcaagaaggtcgacgaacttgaa
ctttcggtgcgttcggccaactgcctgaagaacgacaacatcgtctacatcggcgatctc
atccagaagaccgaagccgagatgctgcgcaccccgaacttcggccgcaagtcgctgaac
gagatcaaggaagtcctggcggcgatgggcctgcacctcggcatggaagtgccggattgg
ccgccggaaaacatcgaagacctcgccaagcgttacgaagaccaatattga
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