Mesorhizobium japonicum MAFF 303099: mlr0349
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Entry
mlr0349 CDS
T00043
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mlo
Mesorhizobium japonicum MAFF 303099
Pathway
mlo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
mlr0349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlo03019
]
mlr0349
Enzymes [BR:
mlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
mlr0349
Messenger RNA biogenesis [BR:
mlo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
mlr0349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BAB47949
UniProt:
Q98N14
LinkDB
All DBs
Position
245975..247378
Genome browser
AA seq
467 aa
AA seq
DB search
MPSNVTAELSGFAALGITGALLKATHNAGFTEPKPIQMQAIPPQLEGRDIFGIAQTGSGK
TAAFALPILSKIIALGTKRRAKTTRALILAPTRELAVQIEDTIKILAKGAHVSTALVLGG
VSRFSQVKKVAPGVDILIATPGRLTDLVREGDLILSDTKWLVLDEGDRMLDMGFINDVKR
IAKATAPDRQTALFSATMPDEIAELAKGLLKNPVRIEVSPQSTAAAEIVQGVVFARTKQK
RQVLSTMLADEAMKSVIIFSRTKHGADRVTKDLERDGFKAAVIHGNKSQNARQKALNDFR
EGSVRILVATDIAARGIDVPGISHVVNFDLPDEAESYVHRIGRTGRNGMDGIAITLCDPS
ENSKLRQVERIIRTKLPIVADHLGSPDPQRNPAEKNERFEPANDRNDRNGRRDGRRPGGE
NKGNGFGKKRFGDKPAFAGERKPEGAKPFKGNNKRRFGGKRPAARAA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgcccagcaacgtcaccgcggaactctccggtttcgcagcgctgggaatcacgggtgcg
ctgctcaaggccacccacaatgccggattcaccgaaccgaagccgatccagatgcaggca
atcccgccgcagctggaaggccgtgacattttcggcatcgcgcagaccggctccggcaag
accgcggcctttgcgctgcccatcctgtcgaagatcatcgcgctcggcaccaagcggcgc
gccaagacgacccgcgcgctgatcctggcgccgacccgcgaactcgccgtgcagatcgag
gataccatcaagatcctcgccaagggcgcccatgtctcgacggcactcgtgctgggaggc
gtctcgcgcttcagccaggtgaagaaggttgctcccggcgtcgatatcctgattgccacg
cccggccggttgaccgacctggtgcgcgagggcgacctcatcctctccgataccaaatgg
ctggtgctggacgagggcgaccgcatgctcgacatgggcttcatcaacgacgtcaagcgc
atcgccaaggcgaccgcgcctgaccgccagacggcgctgttctcggccaccatgccggac
gagatcgccgaactggcaaagggcctgttgaagaaccccgtccgcatcgaagtctcgccg
caaagcaccgcggcggctgagatcgtccagggcgtcgtcttcgcccgcaccaagcagaag
cgccaggtgctgtcgacgatgctcgcagacgaggcgatgaagtccgtcatcattttttcc
cgtaccaagcatggcgccgacagggtgaccaaggacctcgagcgcgatggcttcaaggcc
gccgtcatccatggcaacaagtcgcagaatgcccgtcagaaggcgctgaacgatttccgt
gagggatcggtccgcattctggtcgcgacggacatcgcggcgcgcggcatcgacgtaccc
ggcatcagccatgtcgtgaatttcgacctgccggacgaggctgaaagctacgtccaccgc
atcggccgcaccggccgcaacggcatggacggcatcgcgatcacgctttgcgatccttcg
gagaacagcaagctgcgccaggtcgagcgcatcatccgcaccaagctgccgatcgttgcc
gaccatctcggcagccccgatccgcagcgcaatccggctgaaaagaacgagcgcttcgag
cccgccaatgatcgcaacgaccgcaatggccgtcgcgacggcaggcggccgggcggcgag
aacaagggcaacggctttggcaagaagcgcttcggcgacaagccggcctttgccggtgag
cgcaagccggaaggcgccaagcccttcaagggcaacaacaagcgccgtttcggcggcaag
cgtccggcagcgcgggctgcttaa
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