Mesorhizobium japonicum MAFF 303099: mlr5558
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Entry
mlr5558 CDS
T00043
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mlo
Mesorhizobium japonicum MAFF 303099
Brite
KEGG Orthology (KO) [BR:
mlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlo03016
]
mlr5558
Enzymes [BR:
mlo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
mlr5558
Transfer RNA biogenesis [BR:
mlo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
mlr5558
Prokaryotic type
mlr5558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAB51986
UniProt:
Q98BI6
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All DBs
Position
4460019..4460996
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AA seq
325 aa
AA seq
DB search
MGRRGKKKGRPVSGWVVLDKPVGMGSTEAVSKIKWLFQAEKAGHAGTLDPLASGMLPIAL
GEATKTVPYVQDGAKIYRFTVAWGQERSTDDLEGPVTKSSDLRPAEAEVKALLPKYTGVI
MQTPPQFSAIKIAGERAYDLAREGETVDIPAREIEIGRLDIIEHHADHTVFEVECGKGTY
VRSLARDMGRDLGCFGHISDLRRVEVEPFTSEDFVTIAELEAARFGAQGEDKPEPADDAD
AIDVPVDFGAIDALLVDTSAALDCLPQIAISDDAATKIRLGNPVIIRGRDAPVEAEEACA
TARGKLVAIGAIEQGMFKPKRVFAG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggggcgccgcggcaagaagaagggccggccggtctccggctgggtggtgctggacaag
ccggtggggatgggttccaccgaggccgtgtccaagatcaaatggctgttccaggcggaa
aaggctggccatgccggcacgctcgatccgctggcttccggcatgctgccgatcgcgctc
ggcgaagccaccaagacggtgccctatgtgcaggacggcgccaagatctaccgcttcacc
gtcgcctgggggcaggagcgctcgaccgacgatcttgaagggccagtgacgaagagttca
gacctccgtccggcggaagccgaggtcaaggcgctgctaccgaaatacaccggcgtcatc
atgcagacgccgccgcaattctcggccatcaagatcgcgggcgaacgcgcctacgatctc
gcccgcgaaggcgagacggtcgacattcccgcccgcgagatcgagatcggccgcctcgac
atcatcgagcaccatgccgaccacaccgttttcgaggtcgaatgcggcaagggcacctat
gtgcgctcgctggcacgcgacatgggccgtgacctcggctgcttcggccatatcagcgat
ttgcgccgggtcgaggtcgagccgttcacatcggaggatttcgtcaccatcgccgagctg
gaagccgcccgtttcggtgcgcaaggcgaggacaagccggagcctgccgacgacgccgat
gcgattgacgtgccggtggacttcggcgcgatcgacgcgcttctggtcgacacctcagct
gccttagactgcctgccgcagatcgccatcagcgacgatgcggcgaccaagatccgcctc
ggcaatccggtcatcattcgcggccgcgacgcgcccgtcgaggcggaggaagcctgtgcc
acggcccgtggtaagctggttgccatcggcgcgatcgaacaaggcatgttcaagcccaag
cgggtctttgccgggtga
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