Mycobacterium lepraemurium: MLM_1331
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Entry
MLM_1331 CDS
T05534
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mlp
Mycobacterium lepraemurium
Pathway
mlp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MLM_1331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlp03019
]
MLM_1331
03009 Ribosome biogenesis [BR:
mlp03009
]
MLM_1331
Enzymes [BR:
mlp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MLM_1331
Messenger RNA biogenesis [BR:
mlp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MLM_1331
Ribosome biogenesis [BR:
mlp03009
]
Prokaryotic type
rRNA helicases
MLM_1331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
ATA28033
LinkDB
All DBs
Position
1310448..1312076
Genome browser
AA seq
542 aa
AA seq
DB search
MRAIADVGYETPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSKIDVASTATQA
LVLAPTRELALQVAEAFGRYGAHLSKINVLPIYGGSSYAVQLAGLKRGAHVVVGTPGRVI
DHLERGTLDLSHVDYLVLDEADEMLTMGFAEEVDRILSETPEYKQVVLFSATMPPAIRKL
TAKYLHDPLEVSTKAKTTTAENISQRYIQVAGPRKMDALTRVLEVEPFEAMIVFGRTKQA
TEEVAERLRARGFLAAAINGDIPQGQRQRTVAALKDGSIDILVATGVAARGLDVERISHV
LNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRERHLLKAIEKATRRPLTEAELPTVE
DVNAQRVAKFADTITAGLGAPGIDLFRKLVQDYECEHDVPMADIAAALAVQSRDGEEFLM
APEPPRERRERHTERCERTEKPRSTRPLVTYRIAVGKGHKIGPGAIVGAIANEGGLHRSD
FGHIAIGPDFSLVELPAKLPKSTLKKLEQTRISGVLINLQPDRAAAKARGRDGGKPRRKY
GG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggcgatcgccgacgtcggctacgagacgcccaccggcatccaggccgcgaccatc
ccggcgttgatggcgggttccgacgtcgtcgggctggcccagaccggcaccggcaagacg
gccgcgttcgcgatcccgatcctgtccaagatcgacgtcgccagcaccgccacccaggcg
ctggtgctggcgcccactcgggagctggcgttgcaggtggccgaggcgttcggccgctac
ggcgcgcatctgtcgaagatcaacgtgctgccgatctacggcggctcctcctacgccgtg
cagctggccggattgaaacgcggcgcccacgtggtggtcggcacgccgggccgggtgatc
gaccacctcgagcgcggcacgctggacctgtcgcacgtcgactacctggtgctcgacgag
gccgacgagatgctcaccatggggtttgccgaagaggtcgaccgcatcctgtccgagacc
ccggaatacaagcaggtcgtgctgttctcggcgaccatgccgcccgcgatccgcaagctc
accgccaagtatctgcacgatcccctcgaggtcagcaccaaagcgaaaaccacgaccgcc
gagaacatttcgcagcgctacatccaggtcgccggcccgcgcaaaatggacgcgctgacc
cgggtgctggaggtcgagccgttcgaggcgatgatcgtgttcggccggaccaaacaggct
accgaggaggtcgccgaaaggctcagggcgcgcggcttcttggcggccgcgatcaacggg
gacatcccgcagggccagcgtcagcggaccgtcgccgccctcaaggacggcagcatcgac
atcctggtcgccaccggcgtggccgcccgcggcctggacgtcgaacggatctcacacgtg
ctcaactacgacatcccgcacgacaccgagtcctacgtgcaccggatcgggcgcaccggc
cgggcgggacgctcgggaaccgcgctgctgttcgtctccccgcgagaacgccacctgctc
aaggccattgagaaggcgacccgccggccgctcaccgaagccgagctccccaccgtcgag
gacgtcaatgcccagcgggtggccaagttcgctgacaccatcaccgccgggctcggcgct
cccggcatcgatctgttccgcaagttggttcaggactatgaatgcgagcacgacgtcccg
atggccgacatcgccgccgcgctggccgtgcagtcacgcgacggcgaggagttcctgatg
gcgcccgaaccgccgcgggagcgacgcgaacggcacaccgaacggtgcgagcgcaccgag
aaacccaggagcacaaggccgttggtcacctaccgcatcgcggtgggcaaagggcacaag
atcggtccgggcgcgatcgtgggcgccatcgccaacgagggcgggctgcatcgcagcgat
ttcggccacatcgccatcggccccgacttctcgctggtggagttgccggccaagctgccc
aagtcgacgctgaaaaagcttgagcagacccgcatctccggagtgctgatcaacctgcag
ccggaccgggcggcggccaaggcgcgcggccgggacggcgggaaaccacgcaggaaatac
ggcggatga
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