KEGG   Mycobacterium lepraemurium: MLM_2511
Entry
MLM_2511          CDS       T05534                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
mlp  Mycobacterium lepraemurium
Pathway
mlp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mlp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MLM_2511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mlp03400]
    MLM_2511
DNA repair and recombination proteins [BR:mlp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MLM_2511
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MLM_2511
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_16 AAA_19 AAA_5 Helicase_RecD DUF87 HEM4 AAA_7
Other DBs
NCBI-ProteinID: ATA28802
LinkDB
Position
complement(2480492..2482636)
AA seq 714 aa
MVAHSEYRPAEKAVEGLVRSGGRFEVVSPHAPAGDQPAAIDELERRIRAGERDVVLLGAT
GTGKSATTAWFIERLQRPTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAY
IAQTDTYIEKDSSINDDVERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDRSVEL
RVGTEVPRDALLRLLVDVQYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIE
ALYYLHPLTGDVIRQVDSLRIFPATHYVAGPERMAHAISTIEQELAERLAELEGQGKLLE
AQRLRMRTNYDIEMMRQVGFCSGIENYSRHIDGRGPGSPPATLLDYFPEDFLLVIDESHV
TVPQIGGMYEGDMSRKRNLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELG
QTGGEFVEQVIRPTGLVDPKVVVKPTKGQIDDLIGEIRKRTEADERVLVTTLTKKMAEDL
TDYLLEMGIRVRYLHSEVDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILD
ADKEGFLRSARSLIQTIGRAARNVSGEVHMYADTITESMKEAIDETERRRAKQIAYNEAH
GIDPQPLRKKIADILDQVYREADDTDTAEIGSGRSMSRGRRAQGEPGRAVSAGIVEGRDT
TNMPRAELADLIKDLTAQMMAAARDLQFELAARFRDEIADLKKELRGMDAVGLK
NT seq 2145 nt   +upstreamnt  +downstreamnt
gtggtcgcgcattcggagtaccgcccggccgaaaaggccgtcgaagggctggtgcggtcc
ggcggccgcttcgaggtggtcagcccgcacgcgccggccggtgaccagccggccgccatc
gacgagctcgagcgccgcatcagggcgggggagcgcgacgtggtgctgctcggggccacc
ggcaccggcaagtcggccaccaccgcctggttcatcgagcggctgcaacggccgacgctg
gtgatggcgcccaacaagacgctggccgcccagctggccaacgaactgcgagagatgttg
ccgcacaacgcggttgaatacttcgtgtcgtactacgattactaccagcccgaggcgtac
atcgcgcagaccgacacctacatcgaaaaggacagctccatcaacgacgacgtcgagcgc
ctcaggcactcggcgacctcgagcctgctgtcgcgccgtgacgtggtggtggtggcctcg
gtgtcgtgcatctacggcctgggcacgccgcagtcctacctggaccgctcggtggagctg
cgggtcggcaccgaggtgccccgcgacgccctgctgcggctgctggtcgacgtccaatac
acccgcaacgacctgtccttcacccgcggctcgttccgggtccgcggcgacaccgtcgag
atcatcccgtcctacgaagagctggccgtacgcatcgagttcttcggcgacgagatcgag
gcgctatactacctgcacccgctgaccggcgacgtgatccgccaagtcgactcgctgcgg
atcttcccggccacccactacgtggccggcccggaaagaatggcccacgccatatccacg
atcgagcaggagctggccgagcgactggccgaactggagggccagggcaagcttctggag
gcccaacggctgcggatgcgcaccaactacgacatcgagatgatgcgccaggtcggattc
tgctcgggcatcgagaactattcgcgccacatcgacggccgaggcccgggctcgccgccg
gccaccctgctcgactacttcccggaagatttcctgctggtcatcgacgagtcccacgtc
accgtcccgcagatcggcggcatgtacgagggcgacatgtcgcgcaaacgcaacctggtc
gagtacgggttccggctgccgtcggcctgcgacaaccgcccgctcacctgggaggagttc
gcagaccgcatcggccagacggtctacctgtcggccaccccgggcccgtacgaactcggc
cagaccggcggcgagttcgtcgagcaggtgatccgccccaccgggctggtcgatcccaag
gtggtggtcaagccgaccaaggggcagatcgacgacctgatcggcgaaatccgcaagcgc
accgaggccgacgaacgggtgctggtcacgacgctgaccaagaagatggccgaagacctc
accgactacctgctggagatgggtatccgggtgcgctacctgcactccgaggtcgacacg
ttgcgccgggtggagctgctgcgccagctgcggctgggcgagtacgacgtgcttgtcggc
atcaacctgctgcgtgagggcctcgacctgcccgaggtgtcgctggtggcgatcctggat
gccgacaaggaaggcttcctgcggtccgcgcgcagcctgattcaaaccatcggccgcgca
gcccgcaacgtctccggcgaggtgcacatgtacgccgacaccatcaccgagtcgatgaag
gaggccatcgacgagaccgagcggcgccgggccaagcagatcgcctacaacgaggcccac
ggcatcgatccgcagccgctgcgcaagaagatcgccgacatcctcgaccaggtctaccgg
gaggccgacgacaccgacaccgccgagatcggctccgggcgcagcatgtcccgcgggcgg
cgcgcccagggcgagccgggccgggccgtcagcgccggcatcgtcgagggccgcgacacc
accaacatgccccgcgccgagctggccgacctgatcaaggacctcaccgcgcagatgatg
gccgcggcccgcgacctgcagttcgagctcgccgcgcggttccgcgacgagatcgccgac
ctgaagaaggagctgcgcggaatggacgccgtcggcctgaaatga

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