Mycobacterium lepraemurium: MLM_3659
Help
Entry
MLM_3659 CDS
T05534
Name
(GenBank) DNA-directed RNA polymerase
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mlp
Mycobacterium lepraemurium
Pathway
mlp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mlp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MLM_3659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlp03021
]
MLM_3659
03400 DNA repair and recombination proteins [BR:
mlp03400
]
MLM_3659
Enzymes [BR:
mlp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MLM_3659
Transcription machinery [BR:
mlp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MLM_3659
DNA repair and recombination proteins [BR:
mlp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MLM_3659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ATA29584
LinkDB
All DBs
Position
complement(3683044..3686994)
Genome browser
AA seq
1316 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLRPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDEEMRHNELSTLEAEMMVERKAVEDQRDADLEARAQKLEAD
LAELEAEGAKADARRKVRDSGEREMRQIRDRAQRELDRLEDIWNTFTKLAPKQLIVDENL
YCELVDRYGEYFTGAMGAESIQKLIENFDIDAEAEQLRDVIRNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEVEGDKGEYR
PAAKDTPEVGVYSSPAEAIMAADRGVLSVRAKIKVRLTQLRPPAEIEAELFGANGWQPGD
AWMAETTLGRVLFNELLPVGYPFVNKQMHRKVQASIINDLAERYPMIVVAQTVDKLKDAG
FYWATRSGVTVSMADVLVPPCKKEILDQYEERAEKVEKQFQRGALNHDERNEALVEIWKE
ATDEVGQALREHYPADNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPVKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCETERGIVVE
LAERQPDGTLIRDPYIETSAYARTLGTDAVDEAGNVIVARGEDLGDPEIDALLAAGITSV
KVRSVLTCTTGTGVCATCYSRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GEDITGGLPRVQELFEARIPRGKAPIADVTGRVRLEDGERFYKITIVPDDGSEEVVYDKL
SKRQRLRVFKHEDGSERVLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVREVQE
VYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGSTEFLPGSLIDRAEFEAENRRVVAEGGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGKLIPA
GTGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgaactccggatcggtctggccaccgcggaggacatc
aggcaatggtcgtacggcgaggtcaagaagccggagaccatcaactaccgcacgctcagg
ccggagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgccgcgagcgcatgggccacatcgagttggccgcgccc
gtcacgcacatctggtacttcaagggcgtgccgtcgcgattgggctacctgctcgacctg
gcgcccaaggacctcgagaagatcatctacttcgccgcatacgtgatcacgtccgtcgac
gaggagatgcggcacaacgagctctccaccctcgaggccgagatgatggtggagcgcaag
gccgtcgaggaccagcgcgacgccgacctggaggcccgtgcccagaagctggaggccgac
ctggccgagctggaggccgagggcgccaaggccgacgcgcggcgcaaggtccgcgacagc
ggcgagcgggagatgcgccagatccgcgaccgcgcccagcgcgagctggaccggctggag
gacatctggaacacctttaccaagctggcccccaagcagctgatcgtcgacgagaacctc
tactgcgagctggtcgaccgctacggcgagtacttcaccggcgccatgggcgcggagtcg
atccagaagctcatcgagaacttcgatatcgacgccgaggccgagcagctgcgtgacgtc
atccgaaacggcaaggggcagaagaagcttcgcgctctcaagcggctcaaggtggtcgcc
gcgttccagcagagcggcaactcgccgatgggcatggtgctagacgccgtgccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggtggccggttcgccaccagcgacctc
aacgacctgtaccgtcgggtgatcaaccgcaacaatcggctcaagaggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtcgacgcg
ctgttcgacaacggccgccgcggccgcccggtcaccgggccgggcaaccgcccgctgaag
tcgttgagcgacctgctcaagggcaagcagggccggttccggcagaacttgctcggtaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggcctacccaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgactg
gtcgatctcaaccacgcgcagaacatcaagagcgccaagcggatggtggagcgccagcgt
ccgcaggtgtgggacgtgttggaagaggtcatcgccgagcacccggtgctgctgaaccgc
gcacccaccctgcaccggttgggcatccaggccttcgagccgatgctggtggagggcaag
gcgattcagctgcacccgttggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggcggtgcacctgccgttgagcgcagaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgccggcatctggccgcccgttggccatgccgcggctggac
atggtgaccgggttgtactacctgaccaccgaggtcgaaggcgacaagggcgagtaccgg
cccgctgccaaagacacccccgaggtgggcgtgtactcctcgccggccgaggccatcatg
gccgccgaccgcggggtgctctcggtgcgggccaagatcaaggtgcggctgacccagttg
cgtccgcccgccgagatcgaggccgagctgttcggcgccaacggctggcagccgggcgac
gcctggatggccgagaccacgctgggccgggtgctgttcaacgagctgctgccggtgggc
tacccgttcgtgaacaagcagatgcacaggaaggtgcaggcgtcgatcatcaacgacctg
gccgagcgctacccgatgatcgtggtcgcgcagaccgtggacaagctcaaggacgccggc
ttctactgggcgacccgcagcggtgtcaccgtgtcgatggccgacgtgttggttccgccg
tgcaagaaggagatcctcgaccagtacgaggagcgggccgagaaggtcgaaaagcagttc
cagcgtggtgctttgaaccacgacgagcgcaacgaggcgctggtggagatctggaaggaa
gccaccgacgaggtcggtcaggcgctgcgcgagcactacccggccgacaacccgatcatc
acgatcgtcgactcgggcgccaccggtaacttcacccagacccggacactggccggcatg
aagggtctggtgaccaacccgaagggtgagttcatcccgcgtccggtcaagtcgtcgttc
cgcgagggtctgaccgtgctggagtacttcatcaacacgcacggcgctcgaaagggcttg
gcggacaccgcgttgcgtaccgccgactcgggttatctgacccgtcgtctggtggacgtc
agccaggacgtcatcgtgcgcgagcacgactgcgagaccgagcggggcatcgtcgtcgaa
ctggccgagcgtcagcccgacggcaccctgatacgcgacccgtacatcgaaacctcggcg
tacgcacggactttgggcaccgacgcggtcgacgaggccggcaacgtcatcgtcgcccgc
ggcgaggacctcggtgacccggagatcgacgccctgctggcggccggcatcacgtcggtc
aaggtgcgctcggtgctgacctgcaccacgggcaccggcgtgtgcgcgacctgttacagc
aggtcgatggccaccgggaagctggtcgacatcggcgaggccgtcggcatcgtcgccgcc
cagtccatcggtgagcccggtacccagctgaccatgcgtaccttccaccagggtggtgtc
ggtgaggacatcaccggcggtctgccccgggtgcaggagctgttcgaggcccgcatcccg
cgcggtaaggcgccgatcgccgacgtcaccggccgggtgcggctcgaggacggtgagcgg
ttctacaagatcaccatcgttcccgacgatggcagcgaggaggtcgtgtacgacaagctg
tccaagcggcagcggctgcgcgtgttcaagcacgaggacggctccgagcgggtgctctcc
gacggcgaccacgttgaggtgggccagcagctgatggaaggctcggccgacccgcacgag
gtgctgcgtgtgcagggcccgcgcgaggtgcagatccacctggtccgcgaggtccaggag
gtctaccgcgcccagggtgtgtcgatccacgacaagcacatcgaggtgatcgtccgccag
atgctgcgccgcgtcaccatcatcgactcgggctcgacggagttcctgcccggctcgctg
atcgaccgcgcggagttcgaggcggagaaccgccgggtggtggccgagggcggcgagccc
gccgccgggcgtccggtgctgatgggtatcacgaaggcgtcgctggccaccgactcgtgg
ctgagcgcggcgtcgttccaggagaccacgcgagtgctgaccgacgcggcgatcaactgc
cgcagcgacaagctcaacggtctgaaggagaacgtgatcatcgggaagctgatcccggcc
ggaaccggcatcaaccggtaccgcaacatccaggtgcagccgaccgaggaggcccgggcc
gccgcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggccaggcc
accggcgccgcggtgccgctggacgactacggctacagcgactaccgctag
DBGET
integrated database retrieval system