Mycobacterium lepraemurium: MLM_3702
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Entry
MLM_3702 CDS
T05534
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mlp
Mycobacterium lepraemurium
Pathway
mlp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MLM_3702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlp03400
]
MLM_3702
Enzymes [BR:
mlp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MLM_3702
DNA repair and recombination proteins [BR:
mlp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MLM_3702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ATA29611
LinkDB
All DBs
Position
3725870..3729175
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AA seq
1101 aa
AA seq
DB search
MMERFDLLGALPAERSTTVLEASAGTGKTFALAGLVTRYLADGAATLDQMLLITFGRAAS
QELRERVRYQIVDAVAAFADPSRAGDNELVAYLLDGSEDRRAARRQRLRDALAGFDAATI
ATTHQFCQLVLRSLGVAGDTAADVTLLDSLDELVAEIVDDLYLAHFGQNHDDPVLHYREA
LRLARDVVNNPSAQLRPLHPEPGSRAAVSLRFANDVLAELYTRKLRLGVLGYDDLLTRLA
DALATEHSPARLRMHQRWPIVMVDEFQDTDPVQWEVIDRAFSGRSTLILIGDPKQAIYAF
RGGDIVTYLRAAENAGQKKTLETNWRSDSALLQRLQVVLRGAQLGDPAIVVNDVAAHHQG
HRLSGAPRNDPFRLRVVSRNTLGRRGIANLPIDKLRQHIGADLAADIRALLAASATFDGK
PLRAGDIAVIVERHRDARACFTALCDAGVPAVYTGNSDVFTSQAAEDWLCLLEAFDQPHR
PGVVRAAAATMFFGETAETLAAGGDALTDRIAQTLREWAGHARERGVAAIFEAAQLLGMG
NRVLGWQGGARHMTDLAHLTQLLGEVAHREHHNLPALRDWLHRQRDERSGAPERNRRLDS
DAAAVQIMTVFVSKGLQYPIVYLPFAFHRNTTDSDVVLFHDEDGTRCLHIGGKDSPDFKT
VERLGRKEDASDDSRLTYVALTRAQAQVVAWWSPAYHEPNGGLSRLLRGRRPGEPVVPDR
CEPAKISDEDALARLREWEAAGGPVIEESVPVPAPPLPGVPVPARLENRHFHRSIDTGWR
RTSYSGLIRQAQPSGVGSEPEAAGLDDEVADILLAPAASVGDVASPMADLPAGATFGTLV
HAVLQTADPFAPDLAAELAARIREHSVWWPVAATPEDIAAAMVPMHDTPLGPLAGGLTLR
RIGLSDRLCELDFELPLAGGDRRSSPPKVRLADLAPLLRAHLPADDVLACYADRLADRSL
GAEPLRGYLTGSIDAVLRIPDGAGHRYLVVDYKTNRLGDAQRPLTAADYDRPRMVEAMVH
SDYPLQALLYSAVLHRFLRWRLAGYDPDRHLGGILYLFVRGMCGPDTPVRDGHASGVFDW
RPPSSLIAALSDLLDAQGVAV
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
gtgatggaacgcttcgacctgttgggcgcgttgccggccgagcgctccaccacggtgctc
gaggccagcgcgggaaccggaaagacgttcgcgttggccgggctggtgacccgctatctc
gccgacggcgccgcgaccctggaccagatgttgctgatcaccttcggccgggccgccagc
caggagctgcgggaacgggtacgctatcaaatcgtcgacgcggtagcggctttcgccgac
ccgtcgcgggcgggcgacaacgagttggtggcctacctgctggacggcagcgaggaccgg
cgcgccgcgcggcggcaacgcctgcgcgacgcgctggccgggttcgacgcggcgacgatc
gccaccacgcatcagttctgccagctggtgttgcgctcgctcggggtcgccggcgacacc
gccgccgacgtgaccttgctggacagcctcgacgagctggtagccgagatcgtcgatgac
ctgtatctggcgcatttcgggcaaaaccacgacgacccggtgctgcactatcgggaggcg
ctgcggctggcccgcgacgtggtcaacaacccgtcggcgcagctgcggccgctgcacccc
gagcccggttcgcgggcggcggtcagcctgcgcttcgccaatgatgttctggccgagctg
tatacgcgcaaactccggctcggcgtgctgggctacgacgatctgctgacccggctggcc
gacgcgctggccaccgagcactcccccgcccggctgcgcatgcaccagcgctggccgatc
gtgatggtcgatgagttccaggacaccgacccggtgcagtgggaggtgatcgaccgcgcg
ttcagcggccgttcgacgctgattctcatcggcgaccccaagcaggcgatctacgcgttt
cgcggcggtgacatcgtcacctacctgcgggcggccgagaacgcggggcagaaaaagacg
ctggaaaccaactggcgcagcgattccgcgctgctgcagcggctgcaggtggtgctgcgc
ggcgcgcagctcggtgaccccgcgatcgtggtgaacgacgtcgcggcgcaccaccagggt
caccggctgtccggggcaccgcgcaacgacccgttccggctgcgggtggtgtcacgaaac
acgttgggacgtcgcggtattgccaaccttcccatcgacaagctgcgccagcacatcggc
gccgacctcgccgccgacatccgtgcgctgctggccgccagcgccaccttcgacgggaaa
ccgttgcgggcgggcgacatcgcggtcatcgtggaacggcaccgggacgcccgggcctgt
ttcaccgcgctgtgcgacgccggcgttcccgccgtctacaccggcaactccgacgtgttc
acctcgcaggcggccgaggattggctgtgcctgctggaggcgttcgatcagccgcaccgg
cccggcgtggtgcgcgcggcggcggcgacgatgttcttcggcgagaccgccgagacgttg
gcggccgggggtgacgcgctgaccgaccggatcgcccagaccttgcgggagtgggccggt
cacgcccgcgaacgcggcgtcgccgccatcttcgaggccgcccagctgctggggatgggc
aatcgggtgctcggctggcagggcggagcgcggcacatgacggacctggcgcatctcacc
cagctgctgggcgaggtggcccaccgtgaacaccacaacctgcccgcgctgcgcgactgg
ctgcaccggcagcgcgacgagcgaagcggcgcgccggaacgcaaccgccggttggacagc
gacgccgccgccgtccagatcatgaccgtcttcgtcagcaaggggctgcagtacccgatc
gtgtacctgccgttcgcgttccaccgcaacaccactgacagcgacgtggtgctgttccac
gacgaggacggcacccgatgcctgcacatcggcggcaaggacagccccgacttcaaaacc
gttgagcggctcggccgtaaagaggacgccagcgacgacagccggctgacgtatgtcgcg
ttgacccgagcgcaggcccaggtggtggcgtggtggtcaccggcctaccatgagcccaac
ggcggcctgtcccggctgctgcggggccgccggcccggcgagccggtggtgccggaccgc
tgcgagccggcgaagatctccgacgaggatgccctggctcggctgcgcgagtgggaggcg
gctggcggcccggtcatcgaggagtcggtgccggtgccggcgccgccgctgcccggcgtg
ccggtgccggcacggctggaaaaccgccacttccaccgcagtatcgacaccggttggcgg
cgcacctcctattccggcctgatccggcaggcccagcccagcggggtgggcagcgaaccc
gaggccgccgggctcgacgacgaggtcgccgacattcttctggccccggcggcatccgtt
ggcgatgttgcctcgccgatggcggaccttccggcgggcgccaccttcggcaccctggtg
cacgccgtgctgcagacggccgacccgttcgcccccgacctggccgccgagctggccgcc
cggatccgagagcactcggtgtggtggccggtggccgcgacccccgaagacatagccgcg
gcgatggtgccgatgcacgacacaccgctgggcccgctggcgggcggcctgacgctgcgc
cggatcgggttgtcggatcgcctgtgcgaactggacttcgagctgccgctggccggcggc
gatcggcgctcgtccccgccgaaggttcggctggccgatctggcgccgctgttgcgcgcg
catctgccggccgacgatgtgctggcctgctacgccgaccggctggcggaccgctccctc
ggcgccgagccgctgcgcggatacctgaccggctcgatcgacgccgtgctgcggatcccg
gacggggcggggcaccgctacctggtggtggactacaagaccaaccggctcggtgatgcg
cagcggccgctgaccgctgccgattacgaccggccccggatggtggaggcgatggtgcac
tcggattatccgctgcaggcgctgctatacagcgctgtgctgcaccggtttctgcgctgg
cggctggccggctacgatccggaccgccatctcggcggcatcctctatctgttcgtgcgg
ggcatgtgcggccccgacacgccggtgcgcgacggtcacgcatcgggcgtcttcgattgg
cgaccgccgtcgtcgttgatcgcggcgctgtccgaccttctggatgcccagggggtggcg
gtgtga
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integrated database retrieval system
