KEGG   Marinobacter sp. LQ44: ASQ50_00390
Entry
ASQ50_00390       CDS       T04470                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mlq  Marinobacter sp. LQ44
Brite
KEGG Orthology (KO) [BR:mlq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mlq03016]
    ASQ50_00390
Enzymes [BR:mlq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     ASQ50_00390
Transfer RNA biogenesis [BR:mlq03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    ASQ50_00390
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: AMQ87261
UniProt: A0A142FLA2
LinkDB
Position
87801..88952
AA seq 383 aa
MTLSAPAVTVPPAPDTVRWIREPDTLDNWLDALEPGVPVVLDTEFERVSTFYPIPGLVQL
GGGGEFWLIDPDVAEASERFRAMLADSQRPKLLYAMSEDLELFRHWLDVMPKGVLDLQIG
AALAGAGFSVGYARLVETLFGETLDKSVTRSDWVARPLSPEQERYALDDIRFLQPVYEWV
CHGLRQRGLQQAMADESQRFADEAASLEDAGQHYLKLRGGWTLNREQQAVLQALVVWREQ
ECRRLDRPRNRVLNDGLLIAIAERCPGSLRALNDVQGVPGGIVKRYGEHLLELVRGAREA
DHTDLKPIPRPLTRDQQALFKKVKRCFRKVADDTDIPIELLAPRKRLEGVIEDGTMAGNP
FFEGWRREILAPVVPEIEELLAQ
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgactctttccgcaccggccgttaccgttcccccggcccctgacactgttcgctggatt
cgcgagccagataccctggacaactggctggacgccctcgagcccggggtaccggtggtg
ctggacacagaatttgagcgggtatctactttctatcccattcccggtctggtgcagttg
ggtggcggcggtgagttctggctgattgatccggatgtagccgaggcctccgaacggttt
cgggcgatgctggcggatagccagcgaccaaagctgctatacgccatgagcgaagacctt
gagctgttccggcactggctggatgtgatgcctaaaggtgtgttggacctccagattggc
gcggcactggccggtgccgggttttccgtgggttatgcccgcctggtggaaaccctgttc
ggcgaaaccctggataaatctgttacccggtccgactgggtagccaggccattaagcccg
gaacaagagcgctatgccctggatgatattcggtttttgcaaccggtgtatgagtgggtc
tgccacggtttgcgccagcgcgggctgcagcaggctatggccgacgagtcacagcgcttt
gcggatgaagcggccagcctggaggacgccggacaacactacctgaaacttcgcggtggc
tggacactgaatcgggaacagcaggcggttctgcaagccctggtggtgtggcgggaacag
gagtgccggcggttggatcgcccccgaaaccgggtgttgaatgatggcttgctgatagcc
attgccgagcgctgccctggctcgctcagagccctgaatgatgtgcagggcgttccgggc
ggcattgtaaagcgttatggtgaacacctgctggaactggttcggggtgccagagaagcc
gaccacaccgatctgaagcccatacccaggccgctgacccgagatcagcaggcgctgttc
aagaaagttaagcgttgcttcagaaaagtggcagacgatactgatatacccattgaattg
ctggcgccaagaaaacgccttgaaggcgttattgaagatggcaccatggcaggtaatccg
ttttttgaaggctggcgccgagagatactggctccggtcgtcccggaaattgaggagctt
ctcgcacaatga

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