Marinobacter sp. LQ44: ASQ50_03220
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Entry
ASQ50_03220 CDS
T04470
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mlq
Marinobacter sp. LQ44
Brite
KEGG Orthology (KO) [BR:
mlq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlq03009
]
ASQ50_03220
Enzymes [BR:
mlq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ASQ50_03220
Ribosome biogenesis [BR:
mlq03009
]
Prokaryotic type
rRNA helicases
ASQ50_03220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
AAA_22
PRAI
SBF_like
Motif
Other DBs
NCBI-ProteinID:
AMQ87769
UniProt:
A0A142FMR0
LinkDB
All DBs
Position
complement(678353..679726)
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AA seq
457 aa
AA seq
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MSSFKELGLSQAMQANLQRLGFEQPTGIQVKALPSALGGKDVIAMAQTGSGKTAAFGIPL
VERLKPKHFAVQALVLCPTRELADQVAKALRELARAKDNVKVLTLCGGVPIGPQIGSLSH
GAHIIVGTPGRVEDHLRKRTLALDRVNTLVLDEADRMLDMGFEEVVLSILAQTPQARQTL
LFSATWPEPIRAMSERFQVEPVDVRVEAKDATSSISEVFYEISPDQKVRAVAALLSEYQP
VSSLVFCTTKRDCDELARELEALGFAALSLHGDLEQKDRDSTLVKFANQSCTVMVATDVA
ARGLDIKALPLVINAEPARDPEVHTHRIGRTGRAGEQGHAITLCAPSQGHKVSRLESARG
ESVVWGDSESLLAQALRPVRPAMKTLCLAGGRKDKVRPGDVLGALTGDAGIPGTAVGKID
LFDFQCFVAVDEAWADKALARLEKGKVKGRKIRVRYA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttttaaagagctggggctgtctcaggccatgcaggcgaatctgcagcggtta
ggttttgagcagccaaccggcatacaggtcaaggcattgccatcagccctgggcggcaag
gatgtgattgccatggcacagaccggcagtggcaagacggctgctttcggcattccgctg
gtggagcgcctgaagccaaagcatttcgcggtgcaggcgctggtgttgtgcccaacccgg
gagctggcggatcaggtggccaaagctctgagagaactggcgcgggcaaaagacaacgtc
aaagtgctcacgctttgtggtggtgttcccataggaccccagattggctcgctcagtcat
ggcgctcatatcatagtgggcacaccgggcagggtggaggatcacctgcgcaagaggacg
ctggcgctggatcgggtgaacacgctggtgctggatgaagcagaccggatgctggatatg
ggttttgaggaggtggttttgtccattcttgcgcaaacaccgcaagctcggcaaaccctc
ttattctcggcaacctggccggaacccattcgggctatgagcgagcgcttccaggttgag
ccagtggatgtgcgggttgaggcaaaggacgcgaccagcagtatttctgaggtgttctat
gagatatcgcctgatcagaaggttcgtgcagttgcagccttgttgtctgagtatcagccg
gtatcctctttggtattctgcacgaccaagcgggactgcgacgaactggcgcgggagctt
gaggcgctcggctttgctgctttgtccttgcatggggatctggagcagaaagaccgggac
agcacgctggtgaagttcgccaatcagagttgcaccgttatggtggccaccgacgtggct
gctcgcggtctggatatcaaggcgttgcccctggtgatcaatgcggaacccgcccgcgac
ccggaagtgcacacccatcgaattggtcgtaccgggcgtgccggtgaacaggggcacgcg
attacactgtgcgcgcccagtcagggccataaagtttcgcggcttgaatcagcccggggt
gagtctgttgtttggggcgattccgaaagcttgctggcgcaagcattgcgcccggtacgc
ccggccatgaaaaccctgtgcctggccggtggccgaaaagacaaagtgcgcccgggcgac
gtgctgggcgccttgaccggggatgcgggtattccgggtacggcagtgggaaaaatagac
ctgttcgatttccagtgttttgtggccgttgatgaagcctgggcagataaagctctggcc
cggcttgagaaaggtaaggtcaaaggccgcaaaatcagggttcgttatgcttga
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