Marinobacter sp. LQ44: ASQ50_03505
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Entry
ASQ50_03505 CDS
T04470
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mlq
Marinobacter sp. LQ44
Pathway
mlq03030
DNA replication
mlq03430
Mismatch repair
mlq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASQ50_03505
03430 Mismatch repair
ASQ50_03505
03440 Homologous recombination
ASQ50_03505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlq03032
]
ASQ50_03505
03400 DNA repair and recombination proteins [BR:
mlq03400
]
ASQ50_03505
Enzymes [BR:
mlq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASQ50_03505
DNA replication proteins [BR:
mlq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASQ50_03505
DNA repair and recombination proteins [BR:
mlq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASQ50_03505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AMQ87819
LinkDB
All DBs
Position
complement(736261..739743)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAKTFVHLRVHSEYSMVDGLVRVKPLIGRVAELGMPAVGLTEQSNMCSLVRFYKAAMGAG
VKPIIGADLWLENPDEPENPFRLTLLARDEKGYLHLTEIISLGYTEGQRYGKPIIRKAWL
EARAAGLIALSGAKMGDVGKALLAGKPELARERAQYWKNLYPGSYYLELQRTERAGDEDC
LHLSVELAAELGLPVVATNDVHFLTADDFEAHEARVCIGESRTLDDPRRDRRFSDQQYLR
SAEEMIELFSDIPEAVENTVEIARRCSVKVRMGEYFLPNYPIPDGMTMDEYFRHVSEEGL
EMRLATILSKDDPEYDQKREEYYKRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYALLITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIEYTA
EKYGREAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKLIPFEVGMTLNKAVEQEP
QLKEFLEQDEEAQEIWEMALKLEGVCRNAGKHAGGVVIAPTKITDFSPLYCDDEGGSLVT
QFDKGDVEDAGLVKFDFLGLRTLTIIKWALHMINPRRQAQGQSELDIATIPLDDKRSFEL
LKKAETTAVFQLESRGMKDLIRRLQPDSLEDMIALVALFRPGPLQSGMVDDFIDRKHGRQ
PLSYPHPDYQYEGLKPVLEPTYGVILYQEQVMQIAQVMAGYTLGNADMLRRAMGKKKPEE
MAKQKAFFLEGCANNGIDETLAENIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYP
AEFMAAVLTADMQNTDKVVTLVEECRNMKLDLLVPDVSRSAYTFTVNSDGQIVYGLGAIK
GLGEGPIDSIVEAAKDGPFQDIFDFCRRVDLKKVNKRAMEALIRAGAMDKLGAGRAQLMA
SIDKAVQQADQQSRNDAAGMIDMFGEMLESSGEGEDPYADVANVREWPEKERLKGEKDTL
GIYLTGHPFDEYEREVRRFVRNSIADLKPNKSPQRVAGLVVAQRTMKTRTGSTMCFITLD
DRSARIEATLFSEAFFENRELLQSDQVIVVEGQVSHDDYSGQMKMRVSSVMDVATARQQF
SRGIRLALHAEQLQNGLLDKLDDTLRPFRNEGSPVWIEYSSAEARTRIELGASWRVQPDD
NLLFELRHLVGEKSVELVYD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacgttcgtacatcttcgcgtacactccgaatactccatggtggatggcctg
gtgcgggtcaagccactgattggccgtgtggccgagctgggcatgccggccgtgggtctc
accgagcaatccaacatgtgctcgctggtgcgcttctataaggcggccatgggcgctggc
gtcaagccaattatcggtgccgatctctggctggaaaacccggacgagccggaaaacccg
tttcggctcaccttgctggcgcgggatgagaaaggctacctgcaccttaccgaaattatt
tccctgggctacaccgagggccagcgctacggcaagccgattatccggaaggcctggctg
gaagcccgcgcggcgggacttattgcgctctccggcgccaaaatgggcgatgtgggtaag
gccctgctggcgggcaagccggaactggctcgggagcgggctcagtactggaagaatttg
tatccgggcagctactacctggaactgcagcgtaccgagcgggcaggtgatgaggattgt
ctgcacctgagtgttgagctggcggctgaactggggctgccagtggtggcaaccaacgat
gtgcacttcctgaccgctgatgatttcgaagcccacgaggcccgggtctgtatcggtgag
agccgcacgctggatgacccccgtcgggaccggagattcagcgatcagcagtatcttcgc
agcgccgaagagatgatcgaactgttttcggacatcccggaggccgttgaaaacacggtc
gagattgcccgccgctgttcggtgaaggtccggatgggcgaatacttcctgccgaactac
ccgattcccgatggcatgaccatggacgagtacttccggcatgtgtccgaggaaggtctg
gagatgcgcctggcaaccatcctgagcaaggatgatccggagtatgaccagaagcgggaa
gaatattacaagcgcctgaagttcgagctggacatcatcattcagatgggcttccccggc
tacttcctgatcgttatggactttatcaagtgggccaagaacaacggtgtgccggtaggg
cccggccggggttccggtgccggttccctggtggcctacgcgctgctgattacggatctt
gacccactggagtacgacctgctgttcgagcggttcctgaatccggaacgggtgtccatg
cccgactttgacgtcgatttctgcatggaaggccgggaccgggtgattgaatacaccgct
gagaaatacggccgggaagcggtttcacagatcattaccttcggtaccatggcggccaag
gcggtggtgcgggatgtggcgcgggtgcaaggcaagtcgtatggcctggcagacaagctg
tccaagctgattccgtttgaagtgggcatgaccctcaacaaagccgtcgagcaggagccc
caacttaaagaattcctggagcaggatgaagaagcccaggaaatctgggaaatggccctc
aagcttgaaggcgtatgccgtaacgccggcaagcatgccggtggcgtggtgatcgcacct
acgaagattaccgatttctcgccgctctactgcgacgatgaaggcggcagcctggtcacc
cagtttgacaagggcgatgtggaagacgctggcctggtgaagtttgacttcctggggttg
cgtaccctgaccatcatcaagtgggccttgcacatgattaacccgcgccggcaggcgcag
gggcagtctgaactggatatcgccaccatcccgctggacgacaagcgctcattcgagttg
ctcaaaaaagctgaaaccaccgccgtgtttcagctggaatcccgcggcatgaaagacctg
atccgccgtctgcagccggattccctcgaagacatgatcgccctggtggccctgttccgc
ccggggccgttgcagtcgggcatggtagacgactttattgaccgtaagcatggccgccag
ccgttgtcttatccacacccggattatcagtatgaaggcctgaagccggtattggagccc
acctacggggttatcctctaccaggagcaggtcatgcagattgcccaggtgatggcgggc
tacaccctcggcaacgccgacatgctgcgccgggccatgggtaagaaaaagccggaagag
atggccaagcagaaggcattcttcctggagggttgtgccaataatggcatcgatgaaacc
ctggcggagaacatcttcgatctggtggagaagttcgccggctacggtttcaacaaatcc
cactccgccgcctacgctctggtgtcgtatcagaccctgtggctcaaggcccattacccg
gcagagttcatggccgcggtactcaccgccgatatgcagaacaccgacaaggtggtcacg
ctggtggaagaatgcaggaacatgaagctggacctgctggtgccggacgtcagccgttct
gcctacacgtttaccgtaaacagcgacgggcagattgtttatggtctgggcgccatcaag
ggactgggcgagggaccgattgatagcatcgtggaggccgccaaagacggcccgttccag
gatatttttgatttctgccgccgggttgacctgaagaaggtcaacaagcgtgccatggag
gcgctgatccgggccggagccatggacaagctcggtgccggccgagcacagctgatggcc
agtatcgacaaggctgtgcagcaagcagaccagcagtcccgcaacgatgccgccggcatg
atcgatatgtttggcgaaatgctggagagcagcggcgagggtgaagacccgtacgccgat
gtcgccaatgtgcgggagtggccggagaaagagcgcctcaagggcgagaaggataccctc
ggtatctaccttacgggccatccgtttgatgaatacgagcgggaagtccggcgctttgtc
cgtaactcaatcgccgatttgaagcccaacaagtcacctcagcgggtggctggtctggtg
gttgcccaacgcaccatgaaaactcgcacgggttccaccatgtgctttatcaccctggat
gaccgcagcgctcggattgaagccaccctgttttccgaggcgtttttcgagaaccgggag
ctgttgcagtctgatcaggtgatcgttgtcgaggggcaggtcagccacgatgactactcc
gggcaaatgaaaatgcgcgtcagctcggtgatggatgtggccaccgcccgccagcagttc
agccgtggcatccggctggcgctgcatgcggaacagttgcagaacgggctgctggacaaa
ctggacgacaccctgcgcccgttccgcaacgaaggcagcccggtgtggattgagtacagc
agtgccgaggccagaacccgtattgagctgggggcgtcttggcgagtacagccggatgac
aacctgttgttcgagctcaggcacctggtaggcgagaagtccgtggaactggtctatgat
taa
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