Marinobacter sp. LQ44: ASQ50_05855
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Entry
ASQ50_05855 CDS
T04470
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mlq
Marinobacter sp. LQ44
Brite
KEGG Orthology (KO) [BR:
mlq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlq03016
]
ASQ50_05855
Enzymes [BR:
mlq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ASQ50_05855
Transfer RNA biogenesis [BR:
mlq03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ASQ50_05855
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
Motif
Other DBs
NCBI-ProteinID:
AMQ88255
UniProt:
A0A142FP46
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Position
1256524..1257060
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AA seq
178 aa
AA seq
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MPRLFFGLEIPEAIKTSLLQVKTQVAGARWQSRGQLHLTLAFLGQVEDHQVALACDLARG
ITQSSFELNVQGLGCFGSPEKPKILWAGVSPENELRDLQNNLATRLTANGFTLENPNFKP
HITLSRFRHPAGSVSSLLDSHQGTVFGLMPVQDFVLYESAPGPGGSIYNVIERFTLQP
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggctgtttttcgggcttgagattcccgaggccatcaagacgagcctcctgcaa
gtcaaaacacaggtggcgggagcccgctggcaaagccgcgggcaactgcacctgaccctg
gcgttcctcggccaggtggaagatcatcaggtggccctggcatgcgacctggccaggggt
attacccaatcgtcgtttgagctcaacgtacaggggctgggctgcttcggttccccggag
aaacctaagatcttatgggctggcgtatcgcctgagaacgaactcagagatctccagaac
aacctggcaaccaggttgaccgccaacgggttcacactcgaaaaccctaacttcaagccg
cacatcacactaagccgttttcggcacccggccgggtcggtttcctcgctgcttgatagc
caccaaggcaccgtgtttggattgatgccggttcaagacttcgtactttacgaaagcgcg
ccagggccgggaggctcgatttataacgtgattgaacggtttaccttgcaaccctga
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