Marinobacter sp. LQ44: ASQ50_09575
Help
Entry
ASQ50_09575 CDS
T04470
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mlq
Marinobacter sp. LQ44
Pathway
mlq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASQ50_09575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlq03019
]
ASQ50_09575
Messenger RNA biogenesis [BR:
mlq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ASQ50_09575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
AMQ88924
LinkDB
All DBs
Position
complement(2050009..2051391)
Genome browser
AA seq
460 aa
AA seq
DB search
MTPDHNDLWFLPLGGTGEIGMNLNLYGHDGQWLMVDCGVTFPKPGRIAADGTVHHRGEPP
VQMADPAFIADRRDKLPGLIITHAHEDHIGAVPYLWPLLQCPVYTSRFTAEILRRKLAEF
DLLHRVPIIEVGTGERRQIGPFNVEWLALTHSIPDPNALMIRTQIGNIFHSGDWKLDDNP
LVGHGYTTSTFTDLADEGVAAMVCDSTNATVPGHSVSEAALHEGLRDLIAVAEGRVIVTC
FGSNIARLHTLASIARETGRYMGLLGRSLVNMSGAAKATGLWPGTDKLISPSHLGYLPRH
EVLGVATGSQGEPRTALRRLAQGSHPDFELEAGDTVIFSARAIPGNEEAIEALISQLRKL
GVIVITAEDAGVPIHASGHPAQDELKAMYRWVQPRIAIPVHGEAEHMDVHADLAKGAGVP
RAMVGRNGDLFMVRPVPGIRRQVVETGRLGWQKQELVRVY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgaccacaacgatctatggtttttaccccttggcggtacgggtgaaatcggc
atgaatctcaacctctacggccacgatggccagtggttgatggtggactgcggggtgacc
ttccccaagccgggccgtatcgcggccgatggcacggtgcatcaccggggagaaccaccg
gtacagatggcagacccggcgtttatcgccgaccggcgggataagctgccggggctgatc
ataacccatgctcacgaggatcacattggtgccgtgccctacctctggccactgctgcag
tgccctgtctacaccagccggtttaccgctgagatcctgcgccgaaagctggctgagttt
gatctgttgcatcgagtgccaatcatcgaagtgggcaccggggagcgccggcagattggc
ccgttcaacgtggagtggctggcgctgactcactcgattcccgaccccaatgcgctgatg
atccgcacccagatcggcaacattttccacagcggtgactggaaactggatgataatccg
ctggttggccacggttacaccacctccacgtttaccgatctggctgatgaaggcgtggct
gccatggtctgtgactccaccaacgctacggtgccgggccactcggtgtccgaggcggcg
ctgcacgaaggcctgcgggacctgattgcggtggccgaggggcgggtgattgtcacctgc
tttggcagcaacatagcccgcctgcatacgctggccagcattgcccgggaaacaggccgc
tatatgggattgttgggccgttcgttggtaaacatgagtggtgcggccaaggctacgggg
ctttggccgggcacagacaaactgatcagcccctcacacctcggttacctgccgcgccac
gaggtgctgggtgtggccaccggcagccagggtgaacccagaactgcgttgcggcgcctg
gcccagggcagccatccggatttcgagctggaagccggtgatacggtgattttcagtgcc
cgagccataccgggtaatgaagaggccatcgaggcgctgatcagccagctgcgcaagctg
ggggtgattgtgattaccgccgaagacgcgggcgtgcccattcatgcctcaggccatccg
gcgcaggatgaactcaaggcgatgtatcgctgggttcagccccgcattgccattccagtt
cacggtgaggctgaacacatggacgtgcatgccgatcttgcgaaaggtgcaggtgtgccc
agggccatggttggccgtaatggcgacctgttcatggtgcggccagtaccgggcattcgg
cgtcaggttgtcgaaaccggacggttggggtggcagaagcaggaactggtcagggtctac
tga
DBGET
integrated database retrieval system
