Marinobacter sp. LQ44: ASQ50_09800
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Entry
ASQ50_09800 CDS
T04470
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mlq
Marinobacter sp. LQ44
Pathway
mlq03030
DNA replication
mlq03430
Mismatch repair
mlq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASQ50_09800
03430 Mismatch repair
ASQ50_09800
03440 Homologous recombination
ASQ50_09800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlq03032
]
ASQ50_09800
03400 DNA repair and recombination proteins [BR:
mlq03400
]
ASQ50_09800
Enzymes [BR:
mlq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASQ50_09800
DNA replication proteins [BR:
mlq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASQ50_09800
DNA repair and recombination proteins [BR:
mlq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASQ50_09800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMQ88961
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All DBs
Position
2105319..2106041
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AA seq
240 aa
AA seq
DB search
MSDSIKSGNSKQDWPDNYRKAAEKAKDARIRAFYQAGCPDPQTPIKEVPLVALDFETTGL
DADRHSIISIGLVPFTLDGIQLGQSWHQIVRPQLPLQQDTVTIHGITHSEIENAPDLADV
LDTLFQHLNGRIPVVHYRNIERPFLNTALQWRLKEQLRFPVIDTMAIEAHLHPKRNPSRW
QQLMGKQPISIRLADSRTRYGLPHYAGHNALIDAIATAELLQAQVQHHFSYDTPIGDLWV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcatcaaaagcgggaacagcaaacaggactggccagacaactaccgaaaa
gccgcggaaaaagcgaaggatgcccgaatccgagctttctaccaagccggctgtcctgac
ccgcaaactcccattaaagaggtgccactggtcgccctcgacttcgaaaccaccggcctg
gatgccgaccgccactccatcatcagcatcggcctggtgccttttaccctcgatggcata
cagttaggccagtcctggcaccagatcgtccgcccgcaactgccgttgcagcaagacacc
gtcaccatccatggcatcacccacagcgaaatcgaaaacgccccggacctggcagacgtt
ctcgacaccctgttccagcacctcaacggccgaatccccgtggtccactaccgcaacata
gaacgcccgtttctcaacaccgccctgcagtggcgtctgaaagaacaactccgcttcccg
gtcatagacaccatggccatcgaagcccacctgcaccccaaacgaaacccaagccgctgg
caacaactcatgggcaaacaacccatctccatccgcctggccgacagccgaacccgctac
ggcttaccccactacgccggccacaacgccctgatagacgccatcgccaccgccgaactg
ctccaggcccaggtgcagcatcatttcagttatgacacacctatcggagatctctgggtc
tga
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