Marinobacter sp. LQ44: ASQ50_10455
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Entry
ASQ50_10455 CDS
T04470
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
mlq
Marinobacter sp. LQ44
Brite
KEGG Orthology (KO) [BR:
mlq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlq03019
]
ASQ50_10455
Enzymes [BR:
mlq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ASQ50_10455
Messenger RNA biogenesis [BR:
mlq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ASQ50_10455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
CON_HrpB
DEAD
ResIII
Flavi_DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMQ89079
UniProt:
A0A142FRH0
LinkDB
All DBs
Position
complement(2254669..2257143)
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AA seq
824 aa
AA seq
DB search
MLPIEHILPELKQTLNQGTTALLQAPPGAGKTTRVPLALLDAPWRDNRKILMLEPRRLAA
RSAARYMAKQLGEAPGQTVGYRTRLDTKVSGSTKIEVVTEGILTRLIQNDPMLEDYAAVL
FDEFHERSLQADLGLALVRESQQALREDLRLLVMSATLDTAPIARVLGNVPVITSEGRAF
PVEVLYRPLPRNARMVDQIVAVIQEALGAQTGSMLVFLPGAGEIRRVAQQLAGQLPANVV
LAPLYGNLKAEEQERAISPAQDGARKIVLATAIAETSLTIEGVRVVIDAGQQRRAVFDPN
SGMTRLVTGRVSKASAEQRKGRAGRVEPGVCYRLWSESEQFGLADYTPPEIQEADLAPLV
LELAQWGARSPEQVGWIDAPPNAHWQQAVELLQWLDLLDAEGAITDHGKAARELGLHPRL
AHMVIKGRTLGLGQLAAELAALLEERDLLGPGSGADLHERIRVLRGERGHRGLDTARLQA
VRQAAKRLCRGPLAQDLPSETDVGRVLAQAYPDRIARRRSGAMPRYQLSNGKGAVLREDD
PLARQDWLVTADLDGKAREATIYLAAPVDLTDLEQDLANHIEEREEALWDDKRGTIVARR
VRKLGALVLAEKPLNQVAPELVQQGLLDAVRRKGLDSLPWSDTARQWVARVRLLAEKFPG
DWPEVSDQFLLDTLETWLAPFMAGMKRWSDLAGINLVQALHALLDYPQQQQLDELAPRAL
TIPTGQNVTLDYSADNGPVLAVKLQALFGWTETPTVAGGRVPVVIHLLSPAQRPLAVTAD
LASFWQNAYPEVRKDMRGRYPKHPWPDDPLTAQAQQGTKKRPAR
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgctcccaatagaacacatactcccagagctaaaacaaaccctgaaccaaggcaccaca
gccttgctgcaggcaccaccgggtgccggtaaaacgacaagggtcccgctggctctgttg
gatgccccatggcgggacaaccggaagatcctgatgttggagcccaggcggctggcggcc
aggtcggcggcccggtatatggcgaagcagttaggtgaggcgccggggcaaacggtgggg
tatcggactcgcctcgatacgaaggtgtcaggcagcacaaagattgaggtggtgaccgag
ggcattctgacgcgcttgattcagaacgacccgatgctggaagactatgccgctgtgctg
tttgatgagtttcacgagcgctccttgcaagccgatctgggattggccctggtgcgagaa
agccagcaggccctgcgggaagacctgagattgctggtgatgtcggccaccctggatacc
gcgcccattgcccgggtgctggggaatgtaccggtaatcaccagcgagggccgggcgttt
ccggtggaggtgttgtaccgccctttgccccgtaatgcccggatggtggaccagatagtg
gcggtgattcaggaggccttgggcgcgcagaccggttccatgctggtatttctgcccggg
gccggggagattcgccgggtggcgcagcagctggcgggtcagttgccggctaacgtggtg
ctggcgccgttgtatggcaatctcaaagccgaagaacaggagcgggcgatttcgccggca
caggacggtgcccgcaaaattgtgctggccacagcgattgctgagaccagtctgactatt
gaaggcgtgcgggtggtgattgatgccggtcagcagcgccgggcggtgtttgatcccaac
agcggtatgacacgccttgtgaccgggcgggtatcaaaggcgtctgccgagcagcgcaag
ggccgggccggtcgggttgagccgggtgtgtgttaccggctgtggagtgagtcggagcag
ttcgggttggcggactacacgccgccggaaatccaggaagccgacctggcgccgctggtg
ctggaattggcccagtggggggcccgttccccggagcaggtgggttggattgatgccccg
ccgaatgcgcactggcagcaggcggtggagttgttgcagtggctggatctgctggatgcc
gagggagccatcacagatcacggcaaggcggcccgggagctgggcctgcaccctcgcctg
gcccatatggtgatcaaaggccgtaccctggggctgggccagctggcggccgagctggcc
gcgctgttggaggagcgggacttgctcgggccaggctccggcgcggatctgcatgaacgg
attcgggtgctgcggggcgaacgcggtcatcgcggcctggacaccgcacggttgcaggcg
gttcggcaggcggcaaaacgactgtgccgtggcccgctggcacaggatttaccctcggaa
accgacgttgggcgggtgttggcccaggcctatccggaccgtattgcccgccgccgctca
ggggccatgccccggtatcagttgagtaacggcaagggtgcggtgttgcgggaggacgat
cccctggctcggcaggactggctggtgacggcggatctggatggtaaggcccgggaagcg
acgatttatctggcggcaccggtcgatctcacggaccttgaacaggacctggctaaccat
atcgaagaacgtgaggaagccctgtgggacgacaaacgcggcaccatcgtcgcccgccgg
gtccgcaagctcggggcactggtgctggcggagaagccgctgaatcaggttgccccggaa
ctggttcagcagggcctgctggacgcggtgcgccgtaaaggtctggacagcctgccctgg
agtgatacggcccgccagtgggttgcccgggtgcgattgctggcggagaaattccccggc
gactggccagaggtcagcgaccagttcttgctggacactctggagacctggttagcgccg
tttatggctggtatgaagcgctggtctgacctggcgggcatcaacctggttcaggccctg
catgccctgctggactacccgcaacagcagcaactggacgaactcgcgccccgagctctg
accattcccaccggccagaacgtcaccctggattacagcgccgacaacggcccggtgctg
gcggtcaagttgcaggcgttgtttggctggacggaaacgccgacagtggctggtggtcgg
gtaccggtggtgattcatcttttgtcaccggcccagcggcctttagcggtcactgccgac
ctggccagtttctggcagaacgcctatccggaggtgcgcaaggacatgcgtggccgctat
cccaaacacccctggccggacgacccactcaccgcccaggctcagcagggaacgaaaaaa
cgccccgctcgctga
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