Marinobacter sp. LQ44: ASQ50_10775
Help
Entry
ASQ50_10775 CDS
T04470
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mlq
Marinobacter sp. LQ44
Pathway
mlq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ASQ50_10775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlq03400
]
ASQ50_10775
Enzymes [BR:
mlq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ASQ50_10775
DNA repair and recombination proteins [BR:
mlq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASQ50_10775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_25
HhH-GPD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMQ89135
UniProt:
A0A142FRM6
LinkDB
All DBs
Position
2323481..2327206
Genome browser
AA seq
1241 aa
AA seq
DB search
MTDQITKRNPNLDPLALPLNGSALIEASAGTGKTFTIAILYVRLVLGHGQAEDSPLQNLL
PPNLLVVTFTDAATKELRDRIRTRLTQAAEVFSDPADHLEPTPETALIHKLRDNSYPDPA
TWPDCRKKLLLAAEWMDEAAVSTIHGFCNRMLSEHAFDSGSLFRLTLETDQSDLLDDVAR
DYWRTFVYPLPPALMDEALSHWKTPSDLRKAVRNLIDDPAALGTPPESVHQAINQVVSER
LARANELRAHPWAQWQQEVTDLLNGLNKAKRLHGGSKNAMLKVWDSLLAWAESDELLPEK
LDSAAGYKNQTPEGLANILKGDDPAPHHPAFDAIEALLEFGQNQPSAKSDILRHASHWIA
ERLEAEKQQRSEMGFDDLLTRLDDALHGPRGDQLAATIRRQFPVALIDEFQDTDPVQYRI
FNRIYAVQDNSANTCLLMIGDPKQAIYGFRGADIYTYLQARLGVQARTYTLGTNFRSAKT
MVSAVNRVFEYSDQHSPRGAFLFGKGDSTPLPFQGVKANGTKRLWAVNGEVQPSLAFWTH
ESDETDKDGNPKGLAKGTATADVAETSASEIARLLTLGQAGQAGFVLPDNPADLEPVEPK
DIAVLVNNRNEAAAVRDALGRRRIKSVYLSDRDSVLTSREAKEVLCWLRAFAEPRQLAFI
RAALATPTLGQSWQALDRLLTDELILEREIERFQGYQQQWQSQGVLPMLRSFLMDFEVPG
RLLQRPDGERRLTDILHIAELLQQDSLQLDGEHALVHHFTQILRAADEEDEHRTLRLESD
AGLVKVITVHKSKGLEYPLVFLPFGTAFRAQNQKQAYVRYHDDTGKLVTVFDPTPEDIAQ
ADQERLGEDIRKLYVALTRARFATWVGAAAVDNWHQSGLGYAIAGTPEQPISEALAPLAQ
GRPEIRITPLPEAESTVFSETAPEALGPALISNREAKEDWWIASYSTVEYTGMAGTGITF
TGEVEDAQTQNLLEESAQSDTDEALAVPTVRNHHHFPKGAGPGTFLHELLEWCTAQGFQR
VVDNPELLHEQLARRCGTRGWGDWVEPLQQWLLALIRKPLNLDREGQQSASLEELDSLRP
ELEFWFESRKVSIRQLDALVTGYTLNGADRPRAEANRFNGMLKGFIDLVFQHKGQYYVLD
YKSNSLGEDDTAYTDQAMGQAILDKRYDLQYVLYLLALHRLLKARLPGYDYDQHIGGAVY
LFLRGVNSASGGAFTDKPPRKLIEQLDALFDGETLTGEVAE
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccagatcaccaaacgaaacccgaacctggaccccctggccctgccccttaac
ggcagtgccctgatcgaggccagcgccggcaccggcaaaaccttcaccatcgccatcctg
tatgtgcgcctggtgctgggccatggccaggcagaagacagcccgctgcagaatctgctg
ccgccgaacctgctggtggtgacctttaccgacgccgccaccaaggagctgcgggaccgc
atccgcacccggctgacccaggccgccgaggtattttccgaccccgctgaccacctcgaa
cccaccccggaaaccgcacttatccacaagttgcgggataacagctacccggacccggct
acctggcccgactgccgcaagaagctgctgctggccgccgaatggatggacgaagccgcg
gtatccaccattcacggtttctgtaatcgtatgctcagcgaacacgccttcgacagcggc
agcctgttcaggctgaccctggaaacggaccagagcgacctgctggacgacgtggcccgg
gactactggcgcacctttgtttatccgttgccgccggcgttgatggacgaagcgctgagc
cactggaaaacccccagcgacctgcgcaaggcggtgcgtaacctgattgacgacccggcc
gccctgggcacaccgccagagagtgtccaccaggccatcaaccaggtggtcagcgaacgg
ctggcacgggccaatgaattgagggcacacccttgggcccaatggcagcaggaagtcacc
gatctactgaacggcctgaacaaagccaagcgtctgcacggtggcagcaaaaacgccatg
ctcaaggtctgggacagcctgctggcctgggctgaatccgacgagctgctgccggagaag
ctggacagcgccgccggttacaagaaccagacacccgagggcctggccaacatcctcaaa
ggggacgacccggcaccccatcacccggcctttgacgccatcgaagccttgctggaattc
ggccagaaccagcccagcgccaagtccgacatcctgcgccacgccagccactggattgcc
gagcggctggaagcagaaaagcagcagcgctcggaaatgggctttgatgacctgctcacc
cgcctggacgacgccctgcatggcccccggggcgaccagctggccgccaccatccgccgg
cagtttccggtggcgctgatcgacgaattccaggacaccgacccggtgcagtaccgcatc
ttcaaccggatctacgcagtgcaggacaacagtgccaacacctgcctgctgatgatcggt
gacccgaaacaggccatctacggcttccggggcgccgatatctacacctacctgcaggcc
cggctgggtgtgcaggcccgcacttacaccctgggcaccaacttccgctcggccaagacc
atggtcagcgccgtcaaccgggtattcgagtacagcgaccagcacagcccgagaggggcc
ttcctgttcggcaagggcgacagcaccccactgccattccagggcgtaaaggccaacggc
accaagcggctgtgggccgtgaacggagaggttcaacccagcctggcgttctggacccac
gaatccgatgaaaccgacaaggatggcaaccccaaaggcctggccaaaggcactgccacc
gccgatgtcgccgaaaccagcgccagcgagattgcccggctgctgaccctgggccaggcc
gggcaggcaggctttgtcctgccggataacccggccgacctggagcccgtcgaacccaaa
gacatcgccgtgctggtgaacaaccgcaacgaagcggctgcggtgcgcgatgcccttggc
cgccggcgcatcaagagcgtgtatctgtcggaccgggattcggtgctgacttcccgggaa
gccaaagaagtgttgtgctggcttcgcgccttcgccgaaccccggcaactggccttcatc
cgcgccgccctggcgacgccgaccctgggccagagctggcaagcgctggatcggctgctc
accgacgagctgatactggagcgggaaatcgagcgctttcagggttaccagcaacagtgg
caaagccagggcgtgttgcccatgctgcgcagctttttgatggacttcgaggtgcccggc
cgcctgctgcagcgcccggacggtgagcgaagactgactgacatcctgcacattgccgaa
ctgctgcagcaggacagcctgcaattggatggcgaacatgcgctggtgcatcacttcacc
cagatcctgcgggcggcagacgaagaggacgaacaccgcaccctgcgcctggaaagcgac
gccgggctggtgaaggtgatcaccgtgcacaaatccaagggcctggaatacccgctggtg
ttcttgcccttcggcaccgccttccgggcgcagaatcagaagcaggcgtatgttcgctac
cacgacgacaccggcaagctggtgacggtgttcgacccaacgccggaggacatcgcccaa
gccgatcaggaacgcctgggcgaggacatccgcaaactctacgtggccctgacccgggcc
cggtttgccacctgggtgggcgcggcggctgtggataactggcaccagagtggcctgggc
tatgcgattgccggaacaccggagcagcccatcagcgaagcactggctccgctggcgcag
ggccgcccggaaatccggattaccccgctgccggaagccgaaagcacggtattcagcgaa
accgccccggaagccctggggccggcgctgatctccaaccgcgaagcgaaggaagactgg
tggattgccagttactccaccgtcgaatacaccggcatggcaggcaccggcattaccttc
accggagaggtggaagacgcccagacccagaacctgctggaagaaagtgcccagagcgac
accgatgaggcactcgccgtgcctacggtgcgcaaccatcaccatttccccaaaggcgcc
ggccccggcaccttcctgcacgagttgctggagtggtgtacggcccagggcttccagcgg
gttgtggacaaccccgaactgctgcacgagcagctggcccgccgttgtggcacccggggt
tggggcgactgggtggaacccctgcaacagtggttgctggcgctgatccggaaaccgctg
aacctggaccgggaagggcaacaaagcgccagcctggaagagctggacagcctgcgcccg
gaactggaattctggtttgaaagccgcaaggtcagcatccggcaactggatgccctggtc
accggttataccctgaacggtgccgatcggccccgggccgaggccaaccgcttcaacggc
atgctcaagggctttatcgacctggtgtttcaacacaaggggcagtattacgtgctggac
tacaaatccaattcgctgggtgaggacgacaccgcctacaccgaccaggccatgggccag
gcgatcctggacaagcgctacgacctgcaatacgttctctacctgctggccctgcaccgg
ctgctgaaagcccggctgcccggctatgactacgaccagcacatcggcggcgcagtgtac
ctgttcctgcgcggggttaattccgccagcggcggggcgtttaccgacaagccaccgagg
aaactgattgagcagctggatgccctgttcgatggcgaaaccctgaccggggaggtggcc
gaatga
DBGET
integrated database retrieval system
