Marinobacter sp. LQ44: ASQ50_12250
Help
Entry
ASQ50_12250 CDS
T04470
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mlq
Marinobacter sp. LQ44
Pathway
mlq03420
Nucleotide excision repair
mlq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASQ50_12250 (uvrD)
03430 Mismatch repair
ASQ50_12250 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlq03400
]
ASQ50_12250 (uvrD)
Enzymes [BR:
mlq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASQ50_12250 (uvrD)
DNA repair and recombination proteins [BR:
mlq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASQ50_12250 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ASQ50_12250 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
VMAP-M2
Motif
Other DBs
NCBI-ProteinID:
AMQ89412
LinkDB
All DBs
Position
2671504..2673669
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSHIIDPLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTGILAV
TFTNKAAKEMRYRIEEMMNIPSRGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQL
RMVKRVMREFQIDESQWPPKQAQWFINSQKDEGLRADHIQENPGDHFASTMLKIYRQYEK
LCQQGGLVDFGELLLRSHELWLHRPELLKHYQQRFQHILVDEFQDTNTIQYAWLQVLASN
RVPLTVVGDDDQSIYGWRGAKIENIQQYQRDFPNARLVRLEQNYRSTQMILKAANSVIAN
NQGRLGKELWTDGPDGEPISLYAAFNEQDEANYIADSINAWVNDGNLRSESAILYRSNAQ
SRVLEEALMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYHRDDAAFERVVNIPTRGIG
AKSLAELREYATEQGISLWESAERLLAAGQVKGRAKTGLQSFMEIINGLSEMVGEASLQG
LMKQAIEASGLKDYHASEKGEKGQARVENLEELVNALSDFEVEDGVDPLAEFIAQAALDA
GEAQADAHEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHSMSLEEPGRMEEERRLAYVG
ITRAMKKLVLTYAESRRLYGQEKFHALSRFVREIPADCLQEVRLRNTVTRPAMVGRPNES
MFSQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFDEGAKWLVLAYAPLEA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcccacattatcgaccccctgaacgacgcccagcgcgaggccgttaccgcc
cagaacgatcacctgctggtactggctggcgcgggcagtggtaaaacccgggtgctggtg
caccgcattgcctggctgatgacggtagaccgggtgccgcccaccggcatcctggcggtc
acctttaccaacaaggccgccaaggaaatgcgttaccgcatcgaggagatgatgaatatt
ccctcccgcgggttatggttcggtacttttcacggcattgcccaccgcctgttgcgttcc
cactggaaagacgccggcctgccggagaatttccaggtgctggacagtgacgaccagctg
cgcatggtcaagcgggtgatgcgggagttccagattgatgaaagccagtggccgcccaag
caggcccagtggtttatcaacagccagaaagacgaaggcctgcgcgcggatcacatccag
gaaaacccgggcgaccatttcgccagcaccatgctcaagatttaccgccagtacgaaaag
ctctgccagcagggcggcttggtggattttggtgagctgctgttgcgctcccacgagttg
tggctacatcgcccggaattgttgaagcattaccagcagcgttttcagcacattctggtg
gacgagttccaggacaccaacaccattcaatacgcctggctgcaggtgctggccagcaac
cgggtgccgctgaccgtggtgggtgatgacgaccagtccatttacggctggcgtggcgcc
aagattgagaacatccagcagtaccagcgggactttcccaatgcccggctggtcagactg
gagcagaactaccgatccacccagatgatcctgaaggccgccaactcggtgatcgccaac
aaccagggccgtttgggcaaggaattgtggaccgacggcccggatggcgagcccatcagc
ctgtacgccgcgttcaacgagcaggatgaagccaactacatcgccgattccatcaatgcc
tgggttaacgacggcaatctgcgcagcgaatccgccatcctgtatcgctccaatgcgcaa
tcccgtgtgctggaagaggcgctgatgcgccagggtattccttaccgggtatacggcggc
ctgcgcttctatgatcgccaggaaatccgcaacgccctggcgtacttgcgcctggtgcag
taccaccgggacgacgccgcctttgaacgggtagtaaacattcccacccggggcatcgga
gccaagagcctggcggaattgcgggaatacgccaccgagcaaggcatttccctgtgggaa
tccgccgagcgcctactggcggcgggccaggtcaaaggccgggcgaaaaccggtttgcag
tcgtttatggagatcatcaacggcttgtctgaaatggttggtgaggcgtcattgcagggc
ctgatgaaacaggccatcgaagccagtggcctgaaggactaccacgccagcgaaaaaggc
gagaagggccaggcgagggtagagaacctggaagaactggtgaacgcgctgtcggatttc
gaggtggaagacggtgtcgatccgctggcggaattcatcgcccaggccgcgctggatgcg
ggcgaagcccaggccgatgcccatgaagacagcgtgcagttgatgactctgcactctgcc
aagggcctggaattcccgctggtgttcctggcgggtgttgaggaaggtttgttcccccac
agtatgtcactggaagaaccggggcgcatggaagaggagcggcggctggcctatgtgggc
attacccgggcgatgaaaaagctggtgcttacttacgcggaatcccgccgtttgtacggg
caggagaagttccatgcgttgtcgcggtttgtgcgggagattccggcggattgcctgcag
gaagtgcggttgcgcaatacggtgacgcgcccggcgatggtcggtcgtccgaatgagagc
atgttcagccaggattcggcccagcagtccggtttcagcctcggccagcgcgttcgtcat
ccgaagtttggtgagggcatcgtgatgaactccgaggggaccgggcaccatactcgcgtg
caggtgaactttgatgagggggccaagtggctggtgttggcttatgctccgttggaagcc
tgctag
DBGET
integrated database retrieval system
