Marinobacter sp. LQ44: ASQ50_15745
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Entry
ASQ50_15745 CDS
T04470
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mlq
Marinobacter sp. LQ44
Pathway
mlq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASQ50_15745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlq03019
]
ASQ50_15745
03009 Ribosome biogenesis [BR:
mlq03009
]
ASQ50_15745
Enzymes [BR:
mlq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ASQ50_15745
Messenger RNA biogenesis [BR:
mlq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ASQ50_15745
Ribosome biogenesis [BR:
mlq03009
]
Prokaryotic type
rRNA helicases
ASQ50_15745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMQ90026
UniProt:
A0A142FU67
LinkDB
All DBs
Position
complement(3428529..3430052)
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AA seq
507 aa
AA seq
DB search
MSELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFAL
PLLSRIDASVAEPQILVLAPTRELAIQVAEAFTTYASKFKHFHVLPIYGGQDFAPQIRGL
KRGAQVIVGTPGRMLDHLRKGTLKLGSLKALVLDEADEMLRMGFIDDVEAILAKTPDTCQ
RALFSATMPPQIKKVAQTYLKNATEVRIESETRTVERIAQFVLPVYAERKLDALTRILEV
EPFDASIIFVRTKAETTLLAEKLSARGHAVAPLSGDLNQRQREQTVEDLKRGKKDIIIAT
DVAARGLDVPRITHVINYDVPYDTEAYIHRVGRTGRAGRTGKAILLVTPRERSWLRTLER
ATNSPMEPYQLPSPAALQKMRVEQFEEQLLGFTNDPRSAKAIALLDDIAERNDMDMAAVA
GALACLLEASQPDSLPLEQPEALPEVSAAPRRDRKGPPPGKGGFRKGGPGKKFSKDGKPG
FRKGPPKGKPAGKGGKPSANGPKRAPR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattgtcttttgccgaactggggctggatccagcagtactggaagccgtctcc
gcagttggctatgaaactccgtcgcccatccaggcgcaatccattccagccttgctggcc
ggcaaccacctactgggtgttgcccagaccggtactggcaaaacggccgcgtttgcactg
ccgctgctgagccgtattgatgccagcgttgcagagccccagattctggtgcttgcccct
acccgggagctggccattcaggtggccgaggcgttcaccacctacgccagcaagtttaaa
cacttccacgttctgccgatttacggtggccaggattttgcgccacagattcgcggcctg
aagcgtggcgcccaggtcatcgtgggtacgccaggccggatgctggaccacctgcgcaaa
ggtaccctgaagctgggcagtctgaaggcactggtgctggatgaagcagacgaaatgctg
cgcatgggctttattgacgacgtagaggcaattctggcgaagactccggacacctgtcag
cgcgccctgttctcggccaccatgccgccgcagatcaaaaaggttgcccaaacctatctg
aagaacgccacggaagtacgcatcgaaagcgaaacccgcaccgttgagcgtatcgcccag
ttcgttctgccagtctacgcggagcgcaagctggacgccctgacccgcatcctggaagtg
gagccgttcgacgcctctattatcttcgtgcgcaccaaggccgagaccactctgctggcg
gaaaaactgtcagcccgaggccatgcggttgcgcccctgagcggtgacctcaaccagcgc
cagcgtgaacagaccgtagaagacctcaagcgcggcaagaaagacatcatcatcgccacc
gatgttgctgcccgtggtctggacgtaccccggattacccacgtgatcaactacgacgtg
ccctacgacaccgaggcgtacatccaccgggttggtcgtacaggccgtgcgggccgtacc
ggtaaggcaattctgttagtcacaccgcgcgagcgcagttggctgcgcaccctggagcgg
gccaccaactcgccgatggaaccgtaccagctgccgtcaccggctgcgctgcagaaaatg
cgggtagagcagtttgaagagcaactgctgggcttcaccaacgatccccgatctgccaag
gccattgccctgctggacgacattgccgagcgcaatgacatggacatggccgccgttgct
ggcgccctggcttgcttgcttgaagcctcccagccggattcactgccgctggagcagccc
gaagccctgccggaagtgtccgcagcgccccgtcgcgaccgcaaaggcccacctccgggc
aaaggcggtttccgcaagggtggacccggcaagaaattcagcaaagatggcaagcccggc
ttccgcaagggaccgcccaagggcaagcctgctggcaaaggcggcaagccctctgccaat
ggccccaagcgcgccccgcgctaa
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