Marinobacter sp. LQ44: ASQ50_17010
Help
Entry
ASQ50_17010 CDS
T04470
Name
(GenBank) protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mlq
Marinobacter sp. LQ44
Brite
KEGG Orthology (KO) [BR:
mlq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlq03009
]
ASQ50_17010
Ribosome biogenesis [BR:
mlq03009
]
Prokaryotic type
ribosomal protein modification factors
ASQ50_17010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
OsmC
McdB_C
Motif
Other DBs
NCBI-ProteinID:
AMQ90256
LinkDB
All DBs
Position
complement(3708767..3710962)
Genome browser
AA seq
731 aa
AA seq
DB search
MEIKVNYLDNLRLEAKFDDFTVVSDQPVRYKGDGSAPGPFDYFLASSAMCAAYFVKVYCN
ARDIPTDNIRLSQNNIVDPENRYKQIFKIQVELPEDISDKDRQGIIRSIDRCTVKKVVQT
GPDFQIEVVENLDEDAQALLTVKPEGEANTYIEGKDLPLETTIANMSGILADLGMKIEIA
SWRNIVPHVWSLHVRDTAAHMCFTNGKGATKEAALCSALGEFIERLNCNFFYNDQYFGQD
IANSEFVHYPNEKWFQPGPEGELPEGILDDYCLEIFNPDGELLGTHLFDTNSGTPERGIC
SIPYVRQSDGETVYFPSNLIENLYLSNGMSAGNTLQEAQVQCLSEIFERAVKKEIIENEI
ALPDVPESVLAKYPEIVEGIKALEEQGFPVLVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFHVALERSLTELLQGRSFEGLNDLPAPTFNSMAVTEPNNYVEHFIDSSGVVSWRF
FSAKSDYDFVEWDFSGTNEEEAATLFGILSDMGKDCYMAVFEDLGAPVCRILVPGYSEVY
PVEDLVWDNTNMALEFREDILNLHRLNEDELADLVQRLEEAELDVYMTIVTLTGIEFDEN
TVWGQLTILELKLLIYLALGELEEAQELVDMFLQFNDNTVERGLFYQAMNAALEATLNEE
LALDDYLYNFRRMFGDGVMDAVVGSINGTVRFYGLEETGMDLRGLDRHLKMIESYKKLHA
ARAKKAGISKP
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtcaattatctcgacaacctgaggcttgaggccaaatttgacgatttc
acggtcgtctctgaccagcccgtgcgctacaaaggcgatggctcggcacccggccccttt
gattatttcctggcctcgtccgccatgtgcgcggcctactttgtgaaggtttactgcaac
gcccgggatatccccaccgacaacatccgcctgtcgcaaaacaacattgtagacccggaa
aaccgctacaagcagattttcaagatccaggtcgagctgccggaagacatctccgacaag
gaccgccagggcatcatccgctccatcgaccgttgcaccgtgaaaaaagtggttcaaacc
ggcccggatttccagatcgaagtggtggaaaacctggacgaagacgcccaggcactgctt
accgtgaagccggagggcgaagcgaatacttacatcgaaggcaaagacctgcccctggaa
accactatcgccaacatgagcggcatcctggcagacctgggcatgaaaatcgaaattgcc
tcctggcgcaacattgtgcctcacgtgtggtccctgcacgtgcgtgataccgccgcccac
atgtgcttcaccaacggcaagggcgccaccaaggaggccgccctgtgctcggccctcggt
gagttcatcgagcggctgaactgcaacttcttctacaacgatcagtatttcggccaggac
atcgccaacagcgagttcgtgcattacccgaacgagaaatggttccagcccggcccggaa
ggcgagttgcccgagggcattctcgacgactactgcctggagattttcaacccggacggc
gagctgctcggtacccacctgttcgacaccaactccggcacgccggagcgcggtatctgc
agcattccctatgtgcggcagtcggacggggaaaccgtttacttcccctccaatctgatc
gagaacctgtacctgagcaacggcatgagcgccggcaacaccctgcaggaagcccaggta
cagtgcctgtcggaaatcttcgagcgggcggtgaagaaagagatcatcgaaaacgaaatc
gccctgccggatgtgccggagagcgtgctggccaagtacccggagatcgttgagggtatc
aaagccctggaagaacagggcttcccggtactggtaaaagacgcctcactgggtggtcag
ttcccggtgatgtgcgtgaccctgatgaacccgaagaccggtggcgtgtttgcctccttc
ggtgcgcaccccagcttccacgtggcactggaacgcagcctgaccgaactgctgcagggc
cggagctttgaaggcctgaacgacctgcccgcgcctacgttcaactccatggcggtaact
gagcccaacaactacgttgagcactttatcgattccagcggcgtggtgtcctggcgcttc
ttcagtgccaaatccgactacgattttgtcgaatgggatttctccggcaccaacgaagaa
gaagccgccaccctgtttggcatcctctcggacatgggcaaggattgctacatggccgtg
ttcgaagacctgggcgctccggtgtgccgcattctggtgccgggctattccgaggtgtat
ccggtagaagacctggtgtgggacaacaccaacatggcgctggaattccgggaagacatc
ctcaacctgcaccgtttgaatgaagacgagctggccgatctggtgcagcgcctggaagag
gccgagctggacgtgtacatgaccatcgtcaccctcaccggcatcgagtttgatgagaac
accgtgtggggccagctcaccattctggagctgaaactgctcatctacctggcactgggc
gagctggaagaggcccaggagctggtggacatgttcctgcagtttaacgacaacaccgta
gaacggggcctgttctaccaggccatgaacgcagccctggaagcgacgctgaatgaagaa
ctggcgctggacgactacctctacaacttccgccgtatgtttggtgacggggtaatggac
gccgtggtcggctccattaacggcacggtccgcttctatggcctggaagaaaccggcatg
gacctgcgcggtctggaccggcacctgaagatgatcgagagctacaagaagctgcacgcg
gccagggcaaaaaaggcaggaatttcaaagccatga
DBGET
integrated database retrieval system
