Melampsora larici-populina: MELLADRAFT_104717
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Entry
MELLADRAFT_104717 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mlr
Melampsora larici-populina
Pathway
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_104717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_104717
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_104717
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
MELLADRAFT_104717
Spliceosome [BR:
mlr03041
]
Complex B
Other components
Prp19-related factors
MELLADRAFT_104717
Complex C
MELLADRAFT_104717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Motif
Other DBs
NCBI-GeneID:
18922374
NCBI-ProteinID:
XP_007407817
JGI:
Mellp1_104717
UniProt:
F4RFN6
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MSSNEKKSKTLDSFTSIFPITAELSTLFNSIDCLSNDPEHLLAEQDLLINPNNQTQWLNH
IKNLTESIQREILEQRGKIDEIEIELLGQNLSSEIGRKGYQILVSVYERCLIYFPQSFQL
WNDYLQMRQSFILGKPTHKFNPKVNKKRRSDGTNGEGLNVLDYLMKKDEELEENERDMDG
GQWEGWLDSSLGWCEWKALASAHERALIWLPKMPRLWLSYLTLLTHPACPAPLSLSHTRH
TFDRALRTLPHSLHERIWKPYLRWSEKVAGGETCVRVWRRYLSVDPSLTAHYVEFLRPHK
ALIAAKLLLGLVRKARKGKYKSPDGKSPYQMLIEFMELCERFPNQIGINLKTMERMRLQA
SEPKVTEESSKVPNDSSAPQPADGSAPFQGLVRFAGPPTAVQGKGWTPRPDPRLADQTEA
YDPNTDPSNPQKLDIEKIIELEGFNVYKDQLGLIYSNLATYWIKKTEFEKAKEVFETGIS
KVLTIRDFTTIFDAYAEFSEQYISSLMESISNEEEDNEEEEKELDLKMKQFEELMDRRPF
LVNDVLLRRNPNDVQEWEKRIVLFDKDQDEKIVETYVKAIETINPKKATANFNQLFVNFA
KWYEESGLSANMGTDDGGEGVPDLVNARKVFERAVKVNFQRVDDLAEIWIEWAEMEVRNE
NYTEALKVMQRATMIPVDWKKKQISFHDESLPVQSRLFKSLKLWSFRVDLEESIGTVEST
QKAYDSIFELKIANAQIVINYANFLEENEYWEESFKVYERGIELFSFPIVFEIWNTYLIR
FIKRYQGNKIERARDLFEQALENCPEKFIKPIFLLYAELEENYGLAKRAMSVLERATTKV
ALTERFDMFTYYIAKATENFGLPATRSIYQRAIECLPNNQTAEMCLRFASLEQKLGEIDR
ARAIYAHASQFCDPRTAPEFWETYHTFEIQHGSEDTFREMLRIKRAVQASFNTETSYLAA
KAAAARAGTLKVLQQQDAMTQLANGAQEKPTMAFVPSSKNPVVAEEEKSGNADEIEIDDE
DEE
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgaacgaaaaaaaatcaaaaacactagattcatttacttcaatcttccctatc
actgctgaattatcaactttattcaactcaatagattgtctatcgaatgatccagaacac
ctgctagcagaacaagatttattaatcaatccgaacaatcaaactcaatggttaaatcat
attaaaaacttgactgaatcaattcaaagggaaattttagaacaaaggggtaaaattgac
gagatcgaaatcgaattattaggtcaaaacttatcatctgaaatcggtcgtaaaggttat
caaatcttagtttcagtttatgaaagatgtttaatttatttccctcaatcttttcaactt
tggaatgattatcttcagatgcgacaatctttcattttaggtaaacctacgcataaattc
aatccaaaggttaataagaagagaagatcagacggaaccaatggtgaaggattaaacgta
ctagattatttgatgaaaaaagatgaagaattagaagaaaatgaacgtgatatggatggt
ggtcaatgggaaggatggttagacagtagtttaggttggtgtgaatggaaagcacttgct
agtgctcatgagcgagcattaatttggcttcccaagatgccaagactttggttatcttat
ttaactctcttgactcatccagcttgtcctgcacctttatctctaagccatactcgtcat
actttcgatcgagccttaagaactttacctcatagtttacacgaaaggatctggaaacct
tatttgagatggtcagaaaaagtagcaggtggtgaaacttgtgtaagagtatggagaaga
tacttatcggtggatccttctttaaccgctcattatgttgaattcttaagacctcataaa
gctttgattgctgctaagttacttttaggattagttcgaaaagctagaaaaggaaaatat
aaatccccggatggaaagagtccttatcagatgttgattgagtttatggagttatgtgaa
aggtttcctaatcaaatcggtatcaatttgaaaacgatggaacgaatgagacttcaagca
agcgaaccaaaggtgaccgaggaatcatcgaaagtgccaaacgacagctcagcacctcaa
cctgctgacgggtctgcaccattccaaggtttggtcagattcgctggtccacctacggct
gttcagggtaaaggttggactccacgtcccgaccctagactggcagatcaaacagaagca
tatgaccccaacaccgacccttcaaaccctcaaaaacttgatattgaaaaaatcatcgaa
ttagaaggtttcaatgtttataaagatcaactaggactgatttatagtaacttagctacc
tattggatcaagaaaaccgaatttgaaaaagctaaagaggtcttcgaaacaggaattagt
aaagtattaaccattcgagatttcaccacaatctttgatgcatatgccgaattctcagaa
caatatatttcatctttgatggaatcaatttcaaatgaagaagaagataatgaagaagaa
gaaaaagaattagatttgaagatgaaacaatttgaagaattaatggatcgacgaccgttt
ctggtaaatgatgttttattaagaagaaatccaaatgatgtacaagaatgggaaaaacgt
attgttttgtttgataaagatcaagatgaaaaaattgtggaaacttatgttaaagctatt
gagactattaatcctaaaaaagctacagctaatttcaatcaactgtttgttaattttgct
aaatggtatgaagaatctggtttgagtgctaatatgggtacagatgatgggggtgaaggg
gttcctgatcttgtgaatgctagaaaggtttttgaaagggctgtcaaggttaattttcaa
cgggtggatgacttggccgaaatatggattgagtgggcagagatggaagtaaggaatgag
aattacaccgaagctttgaaggtgatgcaaagagctacgatgataccagttgattggaaa
aagaaacaaattagtttccatgatgaatctttacctgtacaatccagattgttcaagtcg
cttaaactttggtcatttcgagtggatttagaagaatcgatcggaacggttgaatctaca
caaaaagcgtatgattcaatctttgaattaaaaattgctaacgctcaaattgtcattaat
tatgcaaattttttagaagaaaatgaatattgggaagaatcattcaaagtatatgaaaga
ggaattgaattattttcatttccaatcgtatttgaaatttggaatacatatttaattaga
tttataaagagatatcaaggcaataagattgaaagagcaagagatctatttgaacaagcc
ttagagaattgtccagaaaagtttattaaaccgatctttttactttatgctgaacttgaa
gagaattatggtttggctaaaagagctatgagtgtacttgaaagagctactactaaagtt
gctttaactgaaagatttgatatgtttacatattatattgcaaaagcaactgaaaacttt
ggtttacctgctactcgttcaatttatcaacgtgcaattgaatgtttaccgaataaccaa
acagctgaaatgtgtttaagatttgcttcattagaacaaaaattaggtgaaattgacaga
gctcgtgctatttatgcacacgcttctcaattttgtgatccacgtactgctccagaattt
tgggaaacttatcatacttttgaaattcaacatggaagtgaagatacatttagagaaatg
ttgagaattaaaagagcagtacaagcttcatttaatacagaaacatcttatctagctgct
aaagctgcagcagctagagctggaactttgaaagttttacaacaacaagatgcgatgaca
cagttagctaatggagctcaagagaaacctacaatggcttttgttccatcgagtaagaat
cctgttgtggccgaagaggaaaaaagtgggaatgcagatgagattgaaattgatgatgaa
gatgaagaataa
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integrated database retrieval system
