Melampsora larici-populina: MELLADRAFT_108080
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Entry
MELLADRAFT_108080 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mlr
Melampsora larici-populina
Pathway
mlr03022
Basal transcription factors
mlr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MELLADRAFT_108080
09124 Replication and repair
03420 Nucleotide excision repair
MELLADRAFT_108080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlr03021
]
MELLADRAFT_108080
03036 Chromosome and associated proteins [BR:
mlr03036
]
MELLADRAFT_108080
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_108080
Enzymes [BR:
mlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MELLADRAFT_108080
Transcription machinery [BR:
mlr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MELLADRAFT_108080
Chromosome and associated proteins [BR:
mlr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MELLADRAFT_108080
DNA repair and recombination proteins [BR:
mlr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MELLADRAFT_108080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
SNF2-rel_dom
nSTAND3
Motif
Other DBs
NCBI-GeneID:
18923363
NCBI-ProteinID:
XP_007411841
JGI:
Mellp1_108080
UniProt:
F4RRW8
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MIFNIDDLEIIFPYDKIYPEQMSDLKRTLDVGGHCVLEMPSGTGKTISLLSLIVAYQQNH
PEKRKLVYCSRTVPEIEKALIELKRLMAYRASQLRLRAELTNAGPIEDEDFLGIGLTSRK
NLCIHPDVSREKKGKVVDARCRDLTSAWACEQGRANPGSVPLCEFHEKLGELEAGDLIPR
GVWTLEEITNYGHQQGICPYFAVRRMLAYADVVIYSFHYLLDPKVATQVSKEISPNSIVV
FDEAHNIDNVCIESLSIDLNKSILDNAGRAIENLEVKIQEIKRTDASKLQNEYQRLVRGL
QGSELEQAEDEAGVIATPVLPDDLLQEAIPGNIRRAEHFTAFLTRFVEYLKTRMRVLHVV
AETPLSFLQHLKDLTFIDRKPLRFCSERLTSLIRTLELTQLDQYNGLQQVASFATLVATY
EKGFLLILEPFETENATVPNPVFHLTCLDASLAIKPVFDRFSSVVITSGTISPLDMYPKM
LGFESAVQESYSMTLTRNCFLPLVITRGADQVAISSRFEVRNDPSVVRNFGTVLIDYCKI
VPDGIVAFFPSYLYMESIVAAWHDMGILKEVWKYKLIFVETPDAVETSIALENYRRACDN
GKGAVLLSVARGKVSEGIDFDHNYGRAVIMFGIPYQYTESRILKARLEFLRDNYRIREND
YLTFDAMRHAAQCVGRVLRGKTDYGLMIFADKRFAKADKRAKLPKWINAYITDTATNLST
DMAMVISKRFLRSMAQPFEIGQDGISLWGVEEIKAQEEKRRLPGPSATAEEEEGDNYFDG
LEDQALLDMRLGPAE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgattttcaacatcgatgaccttgaaattatatttccttatgacaaaatttatccagaa
cagatgtccgatctcaaacgcaccctagacgtcggtggtcattgtgtgctagagatgcca
tccggaactggaaaaacgatatcacttctctccctcatcgtggcatatcaacaaaatcac
cccgaaaaacggaaattagtgtattgttcccgaaccgtgcccgaaatcgagaaagctttg
atcgaacttaaacgattgatggcttatcgcgcgtctcaactgcgattacgagctgaactc
acaaatgctggtccaatagaagatgaggatttccttgggattgggctcaccagtcggaaa
aacttatgtatacatccagatgtgtcgagagagaagaaaggaaaagtggtcgatgctcga
tgtcgcgacctaacttctgcctgggcctgcgaacaaggccgagccaaccctggaagtgtg
cctctctgtgagtttcatgaaaaactcggagaactcgaagctggcgacttgattccacga
ggtgtatggactttggaggagatcaccaactatggtcatcagcaaggaatctgtccttat
ttcgctgtcagaaggatgctagcctacgcagatgtcgtgatctattcattccactaccta
ctggatccaaaagtggcaactcaagtctcgaaagagatatctcccaactctatcgtcgtg
ttcgatgaagctcacaacatcgacaatgtttgcatcgaatctctatccatcgatctcaac
aaatcaatccttgataacgctggccgtgctatcgaaaacttggaggtcaagattcaagag
atcaaacgtactgacgcctccaagctgcaaaatgaataccaaaggctggtacgaggacta
cagggctcggaactcgaacaagctgaggatgaggctggtgtgatcgcaaccccagtctta
cccgatgatctactgcaagaagcaattcccggaaacatcaggcgagccgaacatttcacg
gccttcttgacgcgttttgtggaatacctgaagactcgaatgagagtcttacatgtcgta
gcagaaaccccgctttcgttcttacagcatctcaaagatcttacgttcattgatcgcaag
ccccttcgattttgttccgagagactcacaagtctgatccgcacattggagttaacgcag
ctagatcaatacaatggtctgcagcaagtcgcaagctttgcaactttggtcgcgacttat
gagaaaggctttcttctaattttggagccattcgagactgagaatgctacagtaccgaat
ccggttttccatcttacttgcctagacgcctcactagcgatcaaacccgtcttcgatcgt
ttcagtagtgtggtgatcacctccggtacaattagtccactcgatatgtaccccaagatg
ctcggattcgaatcggccgtccaagaatcatactccatgaccttgactcgcaactgtttc
ctgccattggtcatcactcgaggtgctgatcaagtcgcaatctcatctagatttgaggtc
aggaatgatccttcggtggtgagaaattttggaacagtcctgattgactattgtaagatc
gtcccagatggaatcgtagcgttctttccttcgtatctctacatggaatctatcgtggca
gcatggcatgatatgggtatcctgaaagaagtgtggaaatacaaattgatttttgtggag
acacctgatgcagtagagacaagcatcgcgttggagaattatcgaagagcttgcgataat
ggaaaaggtgctgtcttgttatcggttgccagaggaaaagtctcggaaggaatcgatttc
gatcataactatggacgagcagtcatcatgtttgggattccatatcaatatactgagagt
agaatactgaaagctcggctcgaattcctgagagacaattatcgaatccgagagaatgat
tatctgacatttgatgcaatgagacatgcagctcaatgtgtgggacgagtattgagaggg
aagacggattatgggctgatgatctttgctgataagcgtttcgcaaaagctgacaaacga
gccaagttaccgaaatggatcaatgcgtacatcactgacaccgctaccaatttgtctacc
gatatggcaatggtcatctcgaagcgtttcctgagatcaatggcccaaccatttgagatt
ggacaagatgggatctcactctggggtgtcgaggagatcaaagcccaggaagagaaacgt
agattgcctggcccatccgcaacagctgaagaagaagaaggagacaattattttgatgga
ctggaagatcaagcgctgttggatatgagacttggaccggccgaatga
DBGET
integrated database retrieval system
