Melampsora larici-populina: MELLADRAFT_108979
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Entry
MELLADRAFT_108979 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
mlr
Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlr03009
]
MELLADRAFT_108979
Ribosome biogenesis [BR:
mlr03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
MELLADRAFT_108979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
18923621
NCBI-ProteinID:
XP_007412888
JGI:
Mellp1_108979
UniProt:
F4RUY0
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MDQSPQNEPIVLLPNSNEPILETNLTVEAHISITSTDIKSNSESMEISNSELNAETNEST
TNIDSSTVKTEDEKCIKSEPNSDGLLEVTGETPQIELAQNVIVNQSNSQITLPQGQDLKS
LDQAIEEAIRKATSQDPCQSQDSTFQPIQHAVTDLAASSSSYPTYPTMSTQPARNFVPNP
SNPHFIGSDPLQYRNDSQTPHRPTAPNLPQDILHIIESDFTNADGTTIDERRETELSRIT
EELRIKVRLSRYQRARDEMSGSETETESNSDEVQIQSHLRPSNGEKVEDEEENQFSETDE
SDVDGSGDEEAERIKNNKLLETIKAEIDESCAMDSKPDNTNESLPHNSEPISSETLDSTN
PTPTSVQTLPEGSAVSCEQDPHLDSTKTPAVSNQAAASESTHQEEVSPTHPVDTKDTAKP
TTGNKSRRRARKRKPKNRTTAEDDESESGSGSDVNDMDVAIKIGPTTEHELKDVPAEIIE
LPFDNVPESDLKDIKSFGVIASLIDNIVVIKGDINMGYETVLDEGSMICWKDGTLIGKVF
ETFGAVTEPHYSIRLPSKLQEMSKNPTENKRFSTDTPVYFVPSQTSFLFTSHIQAQPKGT
DASNLYDEEVTNVDEIEFSDDEAEAAYVRSCRNARKAAAMEKRQQTKPGANKVQSGPSYL
PNPDLLISAGKHMLDKRPSDVLNYNDEDGDGADTDYSVLERPKGLDFNMTTPSISASASN
NNNQNRNTSARSTNKRGSDSRGNNRSQGPSRGKPRGSRGSMKGGRNNSSSDQRDTHSKPP
HNSGPSNSQFPSPSRADVIPSSTPTNWSNPSSSSTLPSTSFTPFIHPLPANPTHAVPQYV
PQAFGGFGGYNPNPPVYNPYNYNLANSSGTASHNTPSYGFAPSLPNMSRIPTCQTYPTFP
SQPQQQGYTGQTGFPTMSPNGFAINGYQPTQSSYYPPYTPSPLSMGSAQFQQQPQQQQRS
FNPDSLPIQQPSVNGIHYNPRFFPPSNQPHLPPHPHQ
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcacctcagaatgaacctatcgtcttgcttcccaactcaaatgaaccaatt
cttgaaactaatttaaccgttgaagcgcatatatcaatcacatcaacagacatcaagtcc
aactcggaatcaatggaaatttctaattcagaactcaatgctgaaacgaatgaaagtacg
actaacatcgattcatcaacagtcaaaacagaagacgaaaaatgcatcaaatccgagcca
aactctgatggtcttcttgaagtgactggagaaacccctcagattgagctagcacagaat
gttatagtaaatcaatcgaattcacagatcactttgcctcagggacaggacttgaaaagc
ttggatcaagcaattgaagaagcgattcgaaaagctacttctcaggacccttgtcaatct
caagattcgacctttcagcctattcaacatgctgtcacagatttagccgcctcatcatca
tcatatcctacctaccctaccatgtcaactcaaccggcacgcaactttgtaccaaatccc
tcaaatcctcactttataggatccgatcctctgcaatatcgaaatgattcacaaacaccg
catagacctactgctccaaatcttccccaggatatcttacatataatagagtcagatttt
actaatgcagatgggacgacgattgacgaacgacgagaaacagaactcagtcgaatcacc
gaagagttgaggatcaaagttcgacttagtcgatatcaacgtgctagagatgagatgtca
ggtagtgagaccgagactgaaagtaattcggatgaagttcaaattcaatctcatttacgt
cctagcaatggcgaaaaagttgaagatgaagaagaaaaccaatttagtgaaactgatgaa
tcagatgtggatggaagtggagacgaagaagctgaacggattaagaataacaaattattg
gaaactatcaaggcagaaattgacgaaagctgcgctatggattctaagcctgacaacaca
aatgaatctctaccccacaattccgagccgatatcttctgagactcttgattcaactaat
ccgactccaacatcggttcagacactaccggagggctcggctgtttcatgtgagcaagat
cctcatcttgatagcactaagactcccgcggtgtcaaatcaggcggcagcttccgaatca
actcatcaagaggaagtatcaccaacacatccagttgacacaaaggatactgcaaagcct
actaccggtaataaatctcgtcgaagagcccgcaaaaggaaacctaagaaccgaacaacg
gcagaagatgacgaatctgaatctggttctggttcagatgtcaatgacatggacgtagct
atcaagattggtcctaccacagaacacgaattgaaagacgttccagctgaaatcattgag
ctaccattcgataatgtacctgaaagcgatttgaaagatatcaaatcttttggagtgatt
gcctctctgattgataacattgttgtcatcaaaggagatatcaatatgggatatgaaacc
gttcttgatgagggtagtatgatatgttggaaggatggcactttgataggtaaagtcttt
gaaacattcggcgctgtcactgaaccacactatagcattcgtcttccaagtaaattgcaa
gagatgtctaaaaaccctactgagaacaaacgtttttcgaccgatacacctgtttacttc
gttccctctcaaaccagctttttattcacttctcatatccaagcgcaacccaaagggacc
gatgctagtaacctttatgacgaagaagtcacgaatgtagatgagattgagtttagtgat
gatgaagcggaagctgcatatgttaggtcttgtagaaatgctaggaaggcagccgctatg
gagaagagacagcagaccaagccgggagccaacaaggttcaatcggggccaagttatctt
ccaaaccctgatctgttgatctcagctggtaaacatatgcttgataagcgaccatccgat
gtgttgaattacaacgatgaagatggcgatggagctgacacagattactcggtactcgag
aggcctaaaggcttagattttaacatgacaacaccgagcatttcagcatcagcatccaac
aacaacaaccagaaccgtaatacttcagctcgatcaaccaacaaacgtgggtcagattct
cgagggaataacagatcccaaggcccttcacgaggaaagccaagggggagtcgaggttcc
atgaagggtggaaggaataattcgtcttcagatcagcgcgatacccattcaaaaccacct
cataacagtggcccttcgaactcccaatttccttcaccctcaagagctgatgttataccg
agctcaacaccaactaactggtctaacccgagctcttcatcgactctccctagcacatcc
ttcactccttttatacaccctcttcctgcaaatcccacccatgcagttccacaatacgtc
cctcaggcctttggtggttttggtggttataatcctaaccctcctgtttataatccttac
aactataacttggccaactcttcaggcactgcgagtcacaataccccttcatatggattc
gcaccatcacttcctaacatgtcaagaataccaacatgccaaacatatcctacctttcct
tctcagccacagcaacagggatacacaggtcaaacagggtttcctacgatgtctcctaat
ggatttgccatcaatggatatcaacctactcaatcttcttactaccctccatatactcca
agtccactatccatgggaagcgctcagtttcagcagcagccgcaacaacaacaacgttca
ttcaatccagattcgttgcccattcaacaaccttcagtgaatggtatacattataatcct
cgtttttttcctccttcaaatcaacctcatcttccacctcacccacatcaatag
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