Melampsora larici-populina: MELLADRAFT_115600
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Entry
MELLADRAFT_115600 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
mlr
Melampsora larici-populina
Pathway
mlr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MELLADRAFT_115600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlr03009
]
MELLADRAFT_115600
Ribosome biogenesis [BR:
mlr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MELLADRAFT_115600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML
WD40_Prp19
EIF3I
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
KNTC1_N
Beta-prop_Nup120_160
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
18925648
NCBI-ProteinID:
XP_007406510
JGI:
Mellp1_115600
UniProt:
F4RC39
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MARSDKIKKHRTMETDPPHLACMGVKSIPALSPQNSNLDLIPPTLSPISEGSHFDILAHR
SSAQRLDKHSRAQDTKAMVHRCRFVDYTPGSITALACTPYTWDPSPHFGFPEVGEKSRGV
LAVGRGNGNIEIWVWLPDSIGPKLGKKKSGSSQGWVLYRTLPGHVPSESTSSNTKAESSS
ALASKIENLVFAHQTTEVDPDNEDDEPNEKINELTSALPRLFGSNGGEEVLEWEWDGSQA
GIIKRTLPMPPSIAVWSLAVCPQSKTLAIGCDDGVIRLATIADDQLEFIGKLDPCKSRLL
SVAWGVLDPPAKSKKTIGRNQVEMRNSNMFLVAGCGDSALRKWNVSTGRCVGRMTVDKLH
GEPTLVWTVAVVGKFIVSGDSMGNINFWDSKSCARIQNIRAHRADILCLVVSPDGNDVFT
SGIDQKTCQLTLTNKGQEGQPDFSKWIMSASRRLHSHDVRALAISPPYKIPTLVLDPSSS
ERVPPAPVEVPVLISGGLDMTLVLCPAASPTTSFFNPLTGSSQAPPNPISDSVSLLFGDS
IQRKVSYVTRRAPAIQLSTGGRLLVCRKDRSISIWQLRSSASSSLTSPLNSVSEPEENDD
PWRQVIDMDLKFQTNLVSSAVSPDGRWLAVSDLYQTKLFILQRTTDGNLQPRRVKNFAPF
HTIKHPSQGASTMHFSPDSTRLVLATSFTSQVVVVGLDEDSKAQTRVLRVFNQHRTHLRT
HQSDHRIVITPPNLSLASPTQDTFDEDGTQTDDLTSSRNTITAIAISSDCQWLASVDSAQ
VLHVFNLDLLKHHCILPTPPLIVNCLSFSPTTPSTLVIGFANNTLQVMNVEDRKIPEWAQ
QVCANPPYNLTQLRDPIMGISFESHVDKDERSINGCNSSISSDTKSHLPHVFLLWGATWT
AKVTLPDHQNGTSSSRQKRPRRLVDLLATGEDENQTNTNGAITPSDVASVKSNTEPVVKH
FVQVSHKYQPILLLDFIGQDEMVIVERPFFGLLANLPPAWSRTGAYGT
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcagataaaatcaaaaagcatcgaacaatggagacggatccacctcacttg
gcttgtatgggagtcaaatctattcctgctctttcaccacaaaactcgaacctcgacctc
ataccacctactctcagtcctatctcagagggttctcactttgatatcttggctcatcgt
tcctctgctcaacggctggacaaacactcgcgagctcaagacacgaaggctatggtacat
cgttgtagattcgttgattacacaccaggaagtattactgcattggcttgtactccctat
acatgggatccttcgccacattttggattccccgaagtgggtgagaaaagtagaggggtt
ctagccgtcggaaggggcaatggaaacattgagatttgggtttggttaccggatagcatt
ggaccaaagcttggaaaaaagaagtcgggttcttctcagggttgggtactctatcggact
cttcctggtcatgtaccatcggaatcaacaagtagtaatacaaaggctgagtcctcttct
gctttggcttcgaaaatcgaaaatttggtctttgcacatcaaactactgaggtcgaccct
gataacgaagatgacgagcctaatgagaagatcaatgagttgacttcagctttgcctcga
cttttcggaagtaatggtggcgaggaagtcttggaatgggaatgggatggtagtcaagct
ggtattatcaaacgcacgctacccatgccaccttcgattgcagtctggtccctggctgtt
tgtccacaatctaagactcttgcaatcggatgcgatgacggtgtgatcagactggctact
atagcggatgatcaacttgagtttattggcaaacttgatccatgcaaatctcgccttctc
agtgtggcttggggtgtactggatccgccggccaagtctaaaaagactattgggcgcaat
caagttgagatgcgcaactcaaatatgtttttggtagcaggatgtggggattctgctctt
cgtaaatggaacgttagcacaggtcgatgcgtcggcaggatgaccgttgataaacttcac
ggagaaccgactctggtatggactgtggcggtagttgggaaattcatcgtatctggtgac
tcaatgggaaacataaacttttgggactccaagtcatgcgcccgaatacaaaacatcaga
gcccatcgggctgacatactctgtttggttgtttcacccgatggaaacgatgtattcacc
tctggtatcgatcagaaaacgtgtcagctcactctgaccaacaaaggccaggagggtcaa
cccgatttttccaaatggatcatgtctgcctcgcgacgtctgcattcacacgatgttaga
gcacttgcaatctcgcctccctacaagattcctaccctcgttctcgacccttcttcgtca
gaaagagttccaccagcaccagtcgaagtgcccgtccttatctctggaggtctcgatatg
accctcgttctgtgccctgctgcctcgcctactacaagctttttcaaccccttaaccgga
agctcgcaagctcccccaaatccaatctcagattcggtgtcgctcttgtttggggattca
atacaacgcaaagtatcgtatgttactcggcgagcgccagccattcagctcagcaccggg
ggtcgtttattagtttgtcgtaaggatcgtagtatcagtatttggcagttacgatcttca
gcttcttcctctctcacttctcctctgaatagtgtttctgagcctgaagagaatgatgac
ccttggcggcaagtgatagatatggatttaaagtttcagaccaatcttgtgtcatcagcc
gtatcgcctgacggacgatggctcgccgtgtctgatctttatcaaactaaacttttcatc
ttacaacggactactgatggaaatctacaacctcggcgggtgaagaactttgcacctttc
cataccatcaaacacccaagtcaaggcgcatctacaatgcatttttcgcccgattctact
cgcttagtactggccacctccttcactagccaggtggtcgtggtaggccttgatgaagat
tctaaagcgcaaactcgggttttaagagtcttcaatcagcatcgtactcatctacgcact
catcagagtgatcatcggattgtgatcaccccaccaaatttatcacttgcttcacccaca
caagatactttcgatgaagatggtacccagactgatgacctgacttcaagcaggaacaca
atcaccgcgatcgcaattagttctgattgtcaatggttggctagtgtcgattcagcacaa
gttctacacgtcttcaatttagatctcctgaagcatcactgtatactccccacgcctccc
ctcatcgtgaactgtctatcattctcacccacaacaccctctacgcttgttattggcttt
gccaacaataccctgcaagtgatgaacgttgaagaccgcaagatcccagaatgggcacaa
caagtgtgcgccaatccaccgtataatttaacacagttacgtgatccgatcatggggatc
agcttcgaatctcacgtggataaagatgagcgatcaataaatggatgtaactcatccatc
agctctgatacgaagtcacatctcccacacgtctttctcctctggggagctacctggaca
gctaaagtcacattaccagatcatcaaaatggaaccagttcctcgcgtcaaaaacgtcca
cgtcggcttgtggatctattagccacaggtgaagatgaaaatcaaactaatactaatgga
gcaatcacaccaagtgacgtggcttcagtaaaatctaatactgaacccgttgtgaaacat
ttcgttcaagttagtcataagtatcaaccgatccttttgttagattttattggtcaagat
gagatggtgattgttgaaagaccattctttggattgttggcaaatctccctccggcttgg
tcaagaactggagcatatggtacttag
DBGET
integrated database retrieval system