Melampsora larici-populina: MELLADRAFT_117666
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Entry
MELLADRAFT_117666 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
mlr
Melampsora larici-populina
Pathway
mlr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MELLADRAFT_117666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_117666
DNA repair and recombination proteins [BR:
mlr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
MELLADRAFT_117666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_2
BHD_1
Transglut_core
Motif
Other DBs
NCBI-GeneID:
18926064
NCBI-ProteinID:
XP_007414831
JGI:
Mellp1_117666
UniProt:
F4S053
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MNNDRIFPRPSSSEAEDDDDEEMDWEEVDVQEEADLSADNDDSLSRPDTTAFNIVLSKSG
ANSTHKRKNPNSAMERMIRHETHRAHTLALLAAGRFRNLLLNDQLLQARLLSMVPLSLVN
AFSSFSPQTHPSEIDRSRLFDSAIKDLVSWWWQSFEIVESLESVRLRTWTEAEALYDTIQ
SSSKTSSAKGKGKEVEDDPFLNLLETGEPIHGSKSLMKRAVLMKGSRDMSAQLFTSLLRA
LNVPARLVFSLQPVTWRGAGGGGKSSKTDTPNDLSTEEQTGRSRTPRDKGATGSVSTAKK
TRSDNKTKKSDQSKMLSVASQASKSKPKQGEWAMKATKAAKAAKMKSINSSATSSRHYVL
TSADGNSTDDQEIPLAQKLASRILEPNQIGGSSPSESHHPDGWRSRPVGKASKVTPIVKL
RKARPVKSKHWTKSPSPEPAQMNRPPVFWTEVYSRPLREWYCVDVTRKRTRCKNLMEPTK
SNPENRMLYVIAFEEDHFIRDVTARYAHSFGATTMKSRLPPKKGSPDWFEKATIKLKRPY
KLRRDEKEDEEISKAQVTEALPTTVGGFKDHPNFALERHLRREEVIHPRKTVGIFRGEQV
FPRSSVVVCKSAETYMREGRRIKGGQEALKLVKPRTVTINRKREEELLKMEGQEVALQGL
FAEWQTELLIPPPIVNGIIPRNGYGNFDLFAPHMLPQGAKHLPYKGIAKTAKKLQVSYAD
AVVSFEFHKRRATPVIQGIIVPELEAEFVLDAYFASEDIAQEKEFSKLQERCLKRWKKII
LALRIRRRLQEEYRNQSIIVSLANAPQEGPSELNNIGIQPEETVIVPIRPAVQSTQSKRP
ADADGYELYADHRVNTMAMPGPSKPSYVNGHKRGRSESVEIDLENKEPRPVSPRKRRMKK
GVPKSPQPSLDVPMMMDVQLDPGIPIKYDKAGRDNDDGISSPLSSPPLASQRTSGSVSAS
KPEPRRRSGRQPATVVSKDKVVEEETGAIDTSRGRASRASAVRASKKIQQPSQPSDRVLR
SRR
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgatcgaattttccctcgcccgtcttcgtctgaagcagaggatgacgatgac
gaagaaatggattgggaggaagtggacgtgcaagaggaagccgacctatcagccgacaac
gatgacagtctatcaaggcctgatactactgctttcaacatcgtgctttcaaagtctggt
gccaactctactcataagagaaagaacccgaacagtgcgatggagcgcatgatacgccat
gagactcatcgcgcacacactttggcccttttggcagcggggcgatttcgtaatctttta
ctcaatgatcaacttcttcaagcgcgcctattgtccatggtaccactgtcactcgtcaac
gctttcagctctttctcacctcaaacgcatccatctgaaatagatagatctcgtctattt
gattcagctataaaggatctagtctcatggtggtggcaatccttcgagatcgtcgaatcc
ttggaaagtgtgagacttcgtacatggacggaggcagaagctctctacgacaccatccag
tcttcttcgaaaactagctcagccaaaggaaaaggaaaagaagtcgaggatgatccattt
ctgaatctacttgagaccggcgaacccatccatggctctaaaagcttgatgaaacgagca
gtactcatgaagggctcacgtgacatgtcggcacagctatttaccagcttgctgagggct
ctcaacgttccggctcggctcgtattcagccttcaaccggtcacttggcgcggtgctggt
ggtggtggcaaatcatctaagacagacacccctaatgatctctcgactgaggagcagacg
ggaagatcacgcactccccgcgataaaggggcaacaggctcggtgtccactgcaaagaaa
acgaggtccgacaacaagaccaaaaaatcagaccagtcaaaaatgctctccgtagcctct
caagcttcgaagtcgaagcccaagcagggcgaatgggccatgaaggcaaccaaagctgca
aaggctgccaagatgaagtccatcaatagtagcgctacgtcatctcgacactatgtctta
acttcggccgatggaaatagtaccgatgaccaggagatacctttggctcaaaagcttgcc
tcgagaattctggagcctaatcaaattggcggaagtagtccaagcgaatcccatcatcct
gatggctggagaagtcggcctgtgggtaaggcgtctaaagtaactccgattgtgaagtta
agaaaagccagacctgtgaaatcaaagcattggacaaagagtcccagcccagaaccagca
caaatgaaccgaccaccagtcttttggactgaagtctactctcgaccactgagggagtgg
tattgtgtggatgtaactcgaaaacggacgaggtgtaagaatttgatggaacctactaag
tccaaccccgagaataggatgttgtatgtcattgcgtttgaagaagatcatttcatccgc
gacgtaaccgcccgctatgcccattcatttggtgcgacaaccatgaagtctcgactacca
ccaaagaagggaagtccagattggtttgaaaaagccacgatcaaactcaagagaccgtac
aagctacgaagagatgaaaaggaggatgaggagatctcaaaggctcaggttacggaagca
ttgccaaccactgttgggggcttcaaagaccatcccaatttcgctctggaacgacattta
cgacgtgaagaggtcatacatccccgcaagaccgttggaatattccgtggagaacaagtt
tttccacgatcgtcagtagtcgtttgcaaaagcgcagaaacatacatgcgcgaaggcaga
cgtatcaaaggcggacaagaagccctcaagctagtcaaaccgcgcacagtgacaatcaac
agaaagcgagaagaagagttgctaaagatggaaggtcaagaagttgccctacagggcctt
tttgcagaatggcaaacagagcttttgataccaccacccatcgtaaatggtattatacct
cgaaacggctacgggaacttcgatctattcgctccccatatgctgccacaaggagccaaa
catttgccatataaaggaatcgccaagacggccaagaagcttcaggtatcttacgctgat
gcagtagtctcattcgaatttcacaaacggcgtgccactcctgtcattcaggggatcatc
gtgccggaattggaggctgaatttgtattggacgcttattttgcctcagaagatattgct
caggagaaagaattttccaagcttcaagagaggtgtttaaaacgatggaaaaagatcatc
ttggctttgcggattagacgacgtctgcaggaagaataccgcaatcagtctatcatcgtg
tctttggcgaatgcacctcaggaaggaccaagcgaactgaacaacataggcatccagccc
gaagagactgtgatagttccgatcagaccggctgtgcagtctacgcaatcgaagcgccct
gctgatgccgatggatatgagttgtatgccgaccatagggtgaataccatggctatgccg
ggtccatccaagccttcatacgtcaatggtcacaagcgaggacgctccgagtctgtcgag
atcgacctagaaaataaagagccccggcctgtctcccctcggaagcgcagaatgaaaaag
ggtgttccaaaatctccccaaccttccttggacgttccaatgatgatggatgtccagtta
gaccctgggattcccatcaagtacgataaagcggggcgtgacaacgacgacggcatctcc
agcccattatcatctcctcctctggcgtctcaaaggacttccggctctgtaagcgcctct
aaacccgaaccacgacggcgctcgggtagacagccggcgactgtggtcagcaaggataaa
gtagtcgaagaagaaacaggcgcgattgatacatcgaggggtagagcctctcgagcaagt
gcagtacgcgcgagtaagaagatacagcagcccagtcaacctagtgatcgtgtacttcga
tctcgaagatag
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integrated database retrieval system
