KEGG   Melampsora larici-populina: MELLADRAFT_117867
Entry
MELLADRAFT_117867 CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K06100  symplekin
Organism
mlr  Melampsora larici-populina
Pathway
mlr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    MELLADRAFT_117867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mlr03021]
    MELLADRAFT_117867
   03019 Messenger RNA biogenesis [BR:mlr03019]
    MELLADRAFT_117867
Transcription machinery [BR:mlr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     MELLADRAFT_117867
Messenger RNA biogenesis [BR:mlr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     MELLADRAFT_117867
    U7-dependent histone pre-mRNA processing factors
     MELLADRAFT_117867
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N XPC-binding
Other DBs
NCBI-GeneID: 18926105
NCBI-ProteinID: XP_007415501
JGI: Mellp1_117867
UniProt: F4S2C6
LinkDB
Position
Unknown
AA seq 1345 aa
MTSSSSNDALLLFSTAISSSPNSIQQRKTLIQLKNQFDSNPALLPILYPSLLSLISSQSN
HPSIKKWVSSIIELAICRPNLNLSSDQRLQIIIQSTETIHKILNSQDLEPNSDLIESKKF
AIQAATTSYPIIFKLINTKSTSDHTRTWTFINQTKSIILSIFRSTSQNVPLGLKITSIKY
LQRLIQVGTKGGSADPRKRSEDPSISMCSANGNSFIKPKEIEQESNLLLEELIRLLYQTN
SPEIASAIIVTTGTLVRHRPTLSTTIINTLTSYIPPSSPLAHNNKPGLQIKGVEKTLRIT
LSHLERHTPSPQIREALVNQLKRLEELNEKEKDRKRRRKEEDASAKKRAKSGNTMVTPVA
QQPTVVEDHERNQSQLQGFDVTSLGLELVVELVIANLLALDDQTLHEAMASFRYTPPTPN
NIPDQSIQPTAALPIPSMISDPITRQPQVPIHVSPPTTRTSTPIPTGSPVRPTMEPIISS
SDIDPEEEIIIPIIEEEEDIEEEKEGIISKWEPESPLFLNEPNRRLLLKFTLDRIAMKED
EVGHEGVWSTLLARLVTRGMDGGGGEGGEEVEERREDVRAALFGFVIADFPKRMHFARVW
LMEEWLATRKQQVDEYPHSIGFTSSTTSIGMNAYDRWLGHILDHILTLSTSTNSQGERNT
RHLLSQFLLDLPNLPEKELNRLVDLCEEPEMLTIGFTSLREITSLRPTLRFKTLDLLLGL
TTHKSRQTRNAAIVSVKSWVGSSGREWKVLGERVVSFAIQLVQRLEENNEEEEEEEELQT
EENLGDGDEGMEDGEVNGNDHGVRFAVVENAVLQSGLGKAKDEETVVRHLELLLALSVKN
PDLLDHLFRVYPNVSPHIRDCVQQLITPLIRSLGAKHPKIVSLIENCQTGSESLVLRILN
ISTEKGGKPPQVIIEAIKNLANTSTNLSPRFIIPLIGELNKEEILFNLPKILSLLNGTLQ
EKLEVKSVFESIIQLPPNNFGSVSTNAPRINRGNEVLLTPVELLVKLHQTDDSGGKISIK
QAIEAIGLCFSMTEIFKPEVLAAFMQQVVDEMTLPTLFLRTVIQAVQTYKSLQPFVSTTL
LSRLIIKKIWTIGQLWEGFMRCSKIIAPHSFGALLQLPREQLKELVGKQGVLKAPLREYV
VKKAGNNKSRVMGLLEILSDTPTTPTTPLPTTPTTITNNDGNHEGSMGIEGSGTRCELGL
ENGKEDEKVGEVENVGDEKVTEEKVGEVGKVGDENITEEKVGEESVGNEKVGEETIGDEK
ITEGKLGNEEEESKLEKCKENEVEKVKELNGLVNDTEEIEPQTQTEVGIGASKSEREGNL
NLLESNSTINTNQSDPKSLILADVG
NT seq 4038 nt   +upstreamnt  +downstreamnt
atgacaagttcaagttcaaatgatgcactcttactattctcaacggccatctcatcctca
ccaaactcaattcaacaacgtaaaactctcattcaacttaaaaatcaattcgattcaaat
cctgctttattgccgattctatatccttctttattatctctcatctcatctcaatcaaat
catccttcgatcaaaaaatgggtatcttcaataatcgaattggctatctgtagacctaat
ctaaacttatcatctgatcaaagattacaaattataattcaatctacagaaactattcat
aagattttaaattcacaagatctagaacctaattcagatttaatcgaatccaagaaattc
gcaatccaagcagccaccacatcatatcccatcatctttaagttaatcaacacaaaatca
acttcagatcatacaagaacttggacattcatcaatcaaaccaaatcaatcatcttatca
atctttagatcaacttctcaaaacgttccattaggattaaaaatcacttcaatcaaatat
cttcaaagattaattcaagtcggaaccaaaggtggttcagctgatcctagaaaacgatca
gaagatcctagtatctcaatgtgttctgctaatggaaattcattcatcaaaccaaaagaa
attgaacaagaatctaatttattattagaggaattgattaggttactttatcaaactaat
tcaccggagatagcatcagccatcatcgttactacaggtacattagtacgacatcgaccc
accctatccaccacgatcataaacaccttaacttcctacatcccaccttcctcaccactt
gcccataacaataaaccaggacttcaaatcaaaggagtcgaaaaaacactacggatcacc
ttatcacatttagaaagacatacaccaagtccacaaatcagagaagctttagtaaaccaa
ttgaaaagattagaagaattaaatgaaaaagaaaaagatcgaaagaggcgaaggaaagaa
gaggatgcgagtgccaagaaacgagccaagagtgggaatacgatggtgacccctgttgct
caacaacctactgttgtggaagatcatgaaaggaatcaatcacagttacaaggatttgat
gtgactagtcttggattagaattagtggtcgaacttgtgattgctaatttacttgcattg
gacgatcaaaccttacatgaagccatggctagctttaggtataccccacctaccccgaat
aatatccccgatcaatcaatccaacctacagccgctttacccatcccatcaatgatttct
gatccaattacaaggcaacctcaagttccgattcatgtctcgccaccaaccacaagaact
tcaactccaatcccaacgggttcacctgttagacctaccatggaacccatcatttcaagt
tcagatatagatccagaagaagaaatcatcataccgatcatagaagaagaagaagacata
gaagaagaaaaagaaggcatcataagcaaatgggaacctgaatctcctttatttcttaat
gaaccaaatcgtagattgttattgaaattcactctggatcgaattgctatgaaggaagat
gaagtgggtcatgaaggggtttggtctactcttttggctagattggttactagaggtatg
gatggtggtgggggtgaaggaggtgaagaagttgaggagagaagagaagatgtgagagct
gcactttttggatttgttatagcggattttccaaaacggatgcattttgcgagggtttgg
ttgatggaagaatggcttgcaacacggaaacaacaagttgatgaataccctcactcgata
ggattcacaagtagtactacaagtattggaatgaatgcatatgatagatggttaggacat
atactagatcatattttaactcttagtactagtactaattctcaaggagaaaggaacaca
cgacatttattatcacaattcttattagatttacctaacttacctgaaaaagaattgaat
agattagtcgatctttgtgaagaacctgagatgttgacgattggatttacatctttaaga
gaaatcaccagtttgcgacctacacttaggtttaagactttagatttgttattaggattg
actacacataagtctagacaaactagaaatgcagctatcgttagtgttaaatcttgggtt
ggttcatcgggtagagaatggaaagtcttgggagaaagagtggttagttttgccatccaa
ttggtacaaaggttagaagaaaataatgaagaagaagaagaagaagaagagttacagaca
gaagagaatttaggtgatggagatgaaggaatggaagatggtgaagtcaatggaaatgat
catggagttcgatttgctgtagttgaaaatgcggtcttacaatctggtttaggtaaagct
aaagatgaagaaactgttgtgagacatcttgagttacttttggctttatcagttaagaat
ccggatttattggatcatctttttcgagtttatccaaatgtatcaccacatatcagagat
tgtgtacaacaacttattacaccattaatccgatcactgggagccaaacatccgaaaata
gtttcattaattgaaaattgtcaaaccggatccgaatccttagttttaagaattttaaat
atctcgaccgaaaaaggaggtaaaccaccgcaagtgattatagaagcgattaaaaattta
gcaaatacatcgactaacctttcacccagatttattataccattgattggtgaattaaat
aaagaagagattttatttaatttacctaagatcttaagtttattgaatggtaccttacaa
gagaaattagaagtgaaatctgtatttgaatcgattatccaattaccacctaataatttc
ggatctgtttcaactaatgcacctagaatcaatcgaggtaatgaagttttattaacaccg
gttgaacttttagtgaaattacatcagactgatgattcaggtggtaagatttcgatcaaa
caagctattgaagctattggactttgtttttcgatgacggagatcttcaaacctgaagtt
ttggcggcttttatgcaacaagtagtagatgaaatgactttacctactttgtttcttaga
acagtaatccaagccgttcaaacttataaatcattacaaccatttgtttctacaacactt
ttgtctagattgattattaagaagatttggacgattggacaactttgggaagggtttatg
agatgttcaaagatcattgcacctcattcgtttggagcacttttacaattacctagagaa
caattaaaagaattggtgggaaaacaaggtgtattgaaagctccattaagagaatatgtg
gttaagaaagcgggaaataataagagtagagtgatggggttattggaaatcttgtctgat
actcctaccacacctactacaccattacctaccacccctactacgattacgaataatgat
gggaatcatgagggtagtatgggtattgaaggtagtggtactcgttgtgaattaggatta
gagaatgggaaagaagatgaaaaggttggagaagtagaaaatgttggagatgaaaaggtt
acagaagaaaaggttggagaagtaggaaaggttggagatgagaacatcacagaagaaaag
gtcggagaagaatcggttggaaatgaaaaggttggagaagaaacgattggcgatgaaaaa
attacagaaggaaagcttggaaatgaagaagaagaatctaaacttgagaaatgtaaagag
aatgaagttgaaaaagttaaagaattgaatggtttagtaaatgatactgaagaaattgaa
cctcaaactcaaacagaagttggaattggagcatccaagtcagaaagagaaggtaatttg
aatctattggaatctaattctactattaatacaaatcaatcggatcctaaaagtttaatt
ttagctgatgtgggataa

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