Melampsora larici-populina: MELLADRAFT_117933
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Entry
MELLADRAFT_117933 CDS
T03138
Name
(RefSeq) nucleoporin
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mlr
Melampsora larici-populina
Pathway
mlr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MELLADRAFT_117933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_117933
03036 Chromosome and associated proteins [BR:
mlr03036
]
MELLADRAFT_117933
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MELLADRAFT_117933
Chromosome and associated proteins [BR:
mlr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MELLADRAFT_117933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
18926112
NCBI-ProteinID:
XP_007415804
JGI:
Mellp1_117933
UniProt:
F4S378
LinkDB
All DBs
Position
Unknown
AA seq
1978 aa
AA seq
DB search
MFGASNNSFGGFGTNNQQSQQPQTGGIFGAAQPAAGGFNAFGQPQQQAAAPTPFGQPAST
GFGANTFGASTSASPFGAAPAASNAFGQPQQNPSNLFGAPAQTQPAASSSFGGFGAPAAS
TTFGGFGTAAPAANNANTGTGLFGAKPAATNTFGAATTGFGSTFGQTATPSPFGATNPVA
AQNGTANPLYAPHTMVENESTPSQKSTFNSIVAMDAYKNWSFEELRFQDYTQGRKTAVPT
NTLGGAFGAQQPQQQQTGFGGFNATANTNQAGGFNQPQQQTGLFGNTAPAGNAFGTQAPT
NNIFGQPAAATTNTFGQAQNTTNSPFGAPAAQPSNAFGGNSLFNSNPTSNAFGTQPAKPS
IFGNTNTTFGGAAPAPATNNLFGQNTTQPQGGLFGAQTNQSQPSTGLFGQTNNTNTGTTG
LFGANNTQNTAAKPGGLFGSTGQTNSPFGQPQANQGAAANPFGFGQNNQQPAQTGTGGLF
GNNAQPAQNSGGGLFGNNNNAQQQQQPAQSGGLFGNTGTNNNNLFGAPSGGLFGNNNNNN
NNNNNNAAGGLFGQKPLTNNSNSLFGNKPATQQNTNNFSNPTGGGLFGSSQATPGFSFGN
NNNNNSSLFGSTNGLQNSQQGASNGLFQSQQSNQPMLQAHIDQGAYGNNPIFANHGNSGG
SRPAIPIKKTLPTIDFKPIPRPNTKITKLRGFARSTSPAKSINSGSPMAASHSSSNMAST
VSRSSAYGRPAEETLLSPKAFIVRPSPKKLTIDPNTLFSMLRDRSATLNGSPGPIGSTPP
PRNPAKSNNPPVFDPDAEAAAHQTFSRNYHAAHTSQSVADKSGHHSKAAGTPMTNKSPTH
TINSQTNSPRVDKSVPLDGSSALGDTIVVTTKEKAKAGEYWTVPAIHDLQLLSRRDLKSV
PNFLVGRKGFGQIQFQEDVDLTGIPNLEDDLCGEVIVFKQSLCSVYPDDPLDKPAVGEGL
NVPAVITLENCWALDKATREPLKDSSHTRVKQFTKRLMKSEDTKFIEYDAKTGQWTFMVE
HFTTYGIDDSEEDSDDGHPATGGDEDTENDSQFTSSEDSSDRPQQKAVRYKRGTRTAPDK
GMISEEEDGPPQMMLFGDEDEAEQEGRVFDVSEGSDRSEDGSHGDSTSCITGSDGDDVPI
NPLGKKRPREVSDSAEDSQSNMEPPSRSQNWRAQLGIESKKVAVMQASLFAGPAPVHKPK
PAMVARPHYAERHAGNVSRQALTNPKSQTLSKVNDHQMEDISSTAQYPSKTIARDTNVLK
KRIPAPKRYSKQIPLSKSILYGHEGSSTNIALALARSFRISWSNRSDQLIHFKDGHIGNM
LKSELPSVTGSELTLRTVPTSTFALSKEIESAECLLQVQLRNTSINTEDGIPVMTTNSQL
RFRHFIAAHDKTDRSNDLNVWRLCSALYDELDLRLPKGAAPEVIERIKSVRREDSFSQWL
QRTVLSSVEQDLRSSSASDESKSPFRGIFKLLTGNQIERACNAAIQANNYRLATLLAQCG
RSDPSFKSDILQQNIVWHELRTDAYIDRDLRKIYELMSGNVTFSRGFGNKSLHVDTSDDI
RIAEHLDWKRNLGIHFWFQASHVNFWYAVKTYEEAFSKDSLASPPLPWYIEKQDRSLTDD
STLEWKINSQEPIHDAMFHLIKMFVDSTYGLETVLEPKGFGPSPFDYRMPWHLYNVLSRV
MRVRDFEDREIIIGDMDDDEGAVEGNSATADILTTNYACQLSRLGLHKWAVFILLHLEVP
ERRKAAVENFLSKNIQLLDEETEAFLKKTLKIPSCWIYTARAELAQYENRLYDQYRWLMK
AEKFTDAHRVVVNELAPEAVIRGDLSELKRLFEGLSSDNVADWPSGGKIFLEYVKVVEQL
PILLRKTVQVPIQSNHELKFLLESVLPNLLREIPLLYDSKNLRGRVGNGMKQEVCMNEMM
SNLTNTSTSVSLVIHKYDYTNDFINLRDLQESDKLLWTQRCAVNGFVKALRRTGSEVI
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgcgtccaacaatagctttggtggctttggcactaacaatcaacaatcacaa
caacctcaaaccggaggaatatttggtgctgctcagcctgcagccggtggttttaatgct
tttggtcaaccacaacagcaggccgcggctcctaccccattcggacaacccgcatccaca
ggatttggtgccaacactttcggcgcctctacttcagctagtccctttggtgctgctcct
gccgcttccaatgctttcggacagccacaacaaaatccttcgaaccttttcggggcacca
gctcaaacccaacccgctgcatcctcaagcttcggtggcttcggagctccagctgcttcg
accacctttggaggatttgggactgccgcacccgctgccaacaacgccaataccggtact
ggtctcttcggtgccaaacctgcggccactaacacgtttggtgctgctactacggggttc
ggtagcacatttggtcagactgccacaccatctccgtttggcgcgacgaatccggtagca
gcgcaaaatgggacggccaaccctttgtatgctcctcataccatggtggaaaatgaatcg
acgccaagtcagaaatctacctttaactccattgtggccatggacgcttataagaattgg
agttttgaagagttgaggttccaagattatacacagggtcgtaaaaccgctgtcccaaca
aacactttgggcggcgcgttcggtgctcaacaaccacagcagcagcaaactggcttcggt
ggattcaatgccacagccaacacaaatcaagccggtggattcaatcaaccgcaacaacaa
actggtctatttgggaacaccgctccagctggtaatgcctttggtacacaggcacccacc
aacaatatctttgggcaaccagcggctgcgactacgaacacttttggccaagcgcaaaac
accaccaacagtcccttcggtgccccggccgcgcaaccttccaatgcatttgggggtaat
tctctcttcaactccaatcctacttcgaatgcttttggaactcagcctgcaaaacccagt
atatttgggaatacgaacaccacctttggaggagctgctccggctcctgccacgaacaat
ctctttggccaaaataccactcaacctcaaggtgggcttttcggagcgcagaccaaccaa
agccaaccatcgactggcctttttggacaaaccaacaatacgaatactggtaccactggc
ttgttcggtgccaataacactcaaaacacggcggccaagcccggtgggcttttcggctct
actggtcagaccaactcgccatttggacagccgcaagcaaatcagggagccgctgccaac
ccgttcggattcgggcaaaacaatcagcaacccgctcaaactggtactggtggtttgttt
ggcaacaatgcgcaacctgcgcaaaactctggaggtggcttattcggcaataacaataat
gctcaacaacagcaacagcctgcgcagtctggcggattgttcggcaatactggaaccaac
aacaacaatctattcggagctccttccggtggcttatttggaaacaataataataacaat
aataataataacaacaatgcagccggtggtctctttgggcagaaacccctcactaacaac
agcaattcgctatttggtaataagcctgcaacccagcagaacacgaacaacttttcgaac
ccgacgggcggggggctctttggttcctcgcaagctacccccggattttcctttggtaac
aacaacaacaacaatagtagcttattcggatctacgaatggactacaaaacagtcaacaa
ggtgcatcaaacggtctcttccaaagtcagcaaagcaatcaaccgatgctacaggcccac
atagatcaaggtgcatacggcaataatcctatctttgccaatcatggaaactctggcgga
tctaggcccgccatccccatcaagaaaaccctaccgacgatcgacttcaagccaatccct
cgtcctaatacgaaaatcaccaaactcagaggttttgctcgttcgactagtcctgccaag
agtatcaacagcggtagtcctatggctgcttctcatagctcttccaatatggcatctaca
gtctcgcgctcctcagcctatggtcgtccggctgaagaaacacttttgagtccgaaggcg
tttatagttagacccagccctaaaaaactcaccatagatcccaatacacttttctccatg
ctccgtgatcgaagtgcgactctcaatggatctcctgggcctatcggtagcactccacct
cccaggaaccccgcgaaatcgaacaacccgcctgtttttgatcccgatgctgaagctgcg
gctcatcaaacgttttcaagaaactatcatgccgctcacacttcacaatctgtcgccgac
aaatccggtcatcattcaaaggcagctggtacaccaatgacaaataaatcacctacccat
accatcaactctcaaacaaattcgcctcgtgtagacaaaagcgtgccgttagacggctcc
tctgctcttggagatactattgtagtgacgactaaagagaaagccaaagcgggtgaatac
tggacggtccctgccatacatgatcttcaacttctgagtcgcagggatctcaagtctgtt
cccaactttttagtcggccgaaaaggattcggtcaaattcaatttcaagaggacgtcgat
ctgactggcatacctaatctggaagatgacctatgtggcgaggtcattgtgttcaaacaa
tccctttgcagtgtttacccagacgacccgctggacaagcctgcagtaggtgaagggctc
aatgtgcctgcggtcatcactttggaaaattgttgggctttagataaagctacgagagag
ccacttaaagattcttctcataccagggtcaaacaattcaccaagcggctaatgaagagt
gaagataccaaatttatcgaatatgacgcaaaaactggtcagtggaccttcatggtagaa
cacttcaccacttacgggatagatgatagcgaagaagacagcgatgatggtcatccagca
actggtggcgacgaagacactgaaaacgatagccagttcacttcttctgaggattcatca
gaccgaccccaacagaaagcagtccgctataaaagaggcacaagaactgcgcccgacaaa
ggtatgatctcagaggaagaagatggcccccctcaaatgatgctatttggcgatgaagac
gaagctgagcaggaaggtcgagtgttcgatgtatctgaaggcagtgatcgatcagaagat
ggctcgcacggtgactccacatcatgcatcacgggaagcgatggggatgatgtaccgatc
aatccgttagggaagaaacgaccacgcgaagtcagtgattcggctgaggactcccaatca
aacatggaacctccttctcggtcccaaaattggagagctcaactcggaatcgagtctaag
aaagtagcagtcatgcaggctagcttgttcgccggtccagctcccgtacataagccgaaa
ccggctatggtcgcacgccctcactacgcagaacgacatgccggtaacgtatctcgacaa
gctttgactaatcccaagtcgcagactttgagcaaagtcaatgaccaccagatggaagat
atttcttcgaccgctcagtatccttccaagactatcgcacgcgatacaaatgtactcaag
aagcgtatccctgcccccaagcgctactctaaacaaatccctctttccaagtccattttg
tatggtcacgagggatcatcgaccaatatcgccttggctctggctcgatcatttcggatc
tcttggagtaatcgatctgatcaattgatccacttcaaggacggccacattggtaatatg
ttgaagtctgagttaccatcagtcactggatctgagttaactctaagaactgttcccaca
agcacatttgctctgtcaaaagaaatcgagtccgcagagtgtttacttcaagtgcaactt
cgtaataccagtatcaacaccgaagatggcattccggtcatgactaccaactctcagctt
cggttccgacactttattgctgcacatgacaagactgatcgatccaatgatttgaatgtc
tggagattatgttcagctttgtacgacgaacttgatttacgtttgcccaagggagctgca
cccgaggtcattgaaaggataaaaagtgtcagaagggaagacagtttttctcaatggtta
caacgcactgtcttgtcttcagtagagcaggatcttcgatcttcatcagccagcgatgaa
agcaaaagtcctttccgtggaatcttcaaactattgacgggtaaccaaatcgaaagagct
tgtaatgcggcgattcaagccaataattatcgacttgcaactctacttgcccaatgtggc
cgtagcgatccgtcattcaagtctgacatattacaacagaacattgtatggcatgaacta
cggaccgatgcttacatcgatcgagatctacgaaaaatctacgagctgatgtctggcaac
gtcactttctctcgcggatttggtaacaaatccttgcatgttgatactagcgatgacatc
aggattgcggaacacttggactggaaacgtaatttggggattcacttttggtttcaggct
tctcatgttaacttttggtatgcagtcaagacttatgaagaagctttctcaaaggactca
ttggccagtccacctctaccgtggtatatcgaaaagcaagatcgaagtttgactgatgat
tcaactcttgagtggaaaataaattcacaagaaccgatacatgatgcaatgtttcatttg
atcaagatgtttgtagactcaacttatggtttagaaactgtcttggaaccaaaaggattt
ggaccttcaccatttgattatcgtatgccatggcatctttataatgttttgtcaagagtt
atgagagtgagggatttcgaagaccgggagattattattggggacatggacgatgatgag
ggtgctgttgaagggaatagtgcaactgctgatatcttgactacaaattatgcatgccaa
ctcagtcgcttaggcttgcataagtgggctgtctttatcttacttcacctcgaagttcca
gagcgtcgaaaggcagccgttgaaaactttctcagcaagaacatacaattgctcgatgaa
gagaccgaagctttcttgaaaaagaccctcaaaataccctcgtgttggatatataccgct
cgtgctgagttagctcaatacgaaaatcgtctatatgatcaataccgctggttgatgaaa
gcggaaaagtttacggatgcacatcgggtggttgtaaatgaattggcaccagaagcagtg
attagaggagatctttcggagttgaagcgattattcgaaggcttgtcttctgacaatgtt
gccgattggccttcgggaggaaagatctttttggagtatgtaaaggttgttgaacaactt
cctatcttacttaggaaaactgttcaggttccaattcaatcaaatcatgaacttaagttc
ttgcttgaatctgttttaccgaacttgttacgagaaatcccattgctatatgatagcaag
aatttacgtggaagggttggaaatggtatgaaacaagaagtttgcatgaatgaaatgatg
tccaacttgaccaatacatctacttcggtttcattggtgatacataaatatgattatacg
aatgatttcattaatttaagagatttacaagaatccgataagttattgtggactcaacgt
tgtgcagtcaatggatttgttaaagctttaagacgtactggatcagaagtgatttga
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integrated database retrieval system
