Melampsora larici-populina: MELLADRAFT_22369
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Entry
MELLADRAFT_22369 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
mlr
Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlr03009
]
MELLADRAFT_22369
Ribosome biogenesis [BR:
mlr03009
]
Eukaryotic type
90S particles
Other 90S particles
MELLADRAFT_22369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
HAT_Syf1_CNRKL1_C
TPR_14
Spt6_S1
HAT_PRP39_N
TPR_19
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
ARM_TT21_C
TPR_6
TPR_16
ANAPC3
DUF7017
ARM_TT21
ARM_TT21_N
NRDE-2
TPR_2
TPR_15
RPN7
Motif
Other DBs
NCBI-GeneID:
18926890
NCBI-ProteinID:
XP_007417048
JGI:
Mellp1_22369
UniProt:
F4S6V4
LinkDB
All DBs
Position
Unknown
AA seq
1489 aa
AA seq
DB search
SSLLNSVEVDFPRGGGTHLTAVEVKQAGHEGKTDADQIFIPDPKPVKDTSSSKRKRSLLD
PSSHQRIKSNNISASQNTPFQNAYRIEHLNHRRLTSGLKLAGLIIEIRPLELIVALPSQL
VGHVPITEISSYYTQKLQESTDQDDEDTDSEDDQSNSDKADDYQHRVKSGGLQGLNEIFK
VGQWIRCMVIHTTSGTPNIAHRASPLVRAAHRVKLTIDPARLNGDLEKKDLSANMTLDGA
VKSIEDNGYVVDLCVPVNSSQQASSSAPQTVTTFVLFSDAIKIPQTHLHNRELWQIGQIV
RCRIDKVSKSGSTCTVFVDPTGIASSLLTTAINIDCVLPLHLVTCLITAVVPEEGLNVEF
LGYYKGTIDLYNLGVGIGGTKVEDRFKAGQKIRARVLWHTRSSSPQKTFSLSLLDHCVNM
VTPGLPLLLQNDTPNGLPSESIEHLMRFNIGYTFQSTRVCGVVKDWGLYVEYSDNSNQQR
VIGFIHISAIRDTHLSDILVEGSGPYRLGTTHKAKVVGISPIDGMLQLSSQPSVVEQPYI
RPQDVAVGEIVTAEVTRLCSSALFLSIFGGLDCVVWPDHYSDVKLQHPEKKFQAGMKLTA
RVLYVNPNKHRIALTLRKSLLDPTFSSITSYATAQPGMVTDAVITRVKARHLEIEFFGQT
RGVIPIREAAEKFSESLSDFRAGRVVKVQILSVDPLARKILASIRCALDTEASKLRESGN
VGDAVFATVKTIGDDHTILTLRRRLGKRNKMGGEIPIPGLISLSILAWRRKVTIDQLKEQ
LHVGDEIDDLVITAKDIQSNLIILGYAKGSKKQKQEPETERPLFNSSAFEVGDLVTGTVL
DIHAKNLLMFLKKDGSENACVGQGFLSIEKLATREKKNCAVVKVDRQTSKVYLTLRSSRL
NRGVQKSASEVRDRPIVSIKDLKKGDKIRGFIQRICEKAGLLVRIGTNLSAKVKISELFD
QDIPDWVGKFKVGQVVSGVIITPVKASRGIQLSLRENPFGPKVSDPKKLVLEKFQEGQIV
GTTIRKIEKYGMFLAIDDAGISGLCHVSQLSDDDEVDRNWAKKYKEGMRLQAALVKVDLK
ARRISLSIKPSIVGEQELDSGDDEDESDDEDVEEEELDHSNVEKDDSVDMVVTSKSVNQP
LAVQIQAPCLALPGGFNWNSTVQTRAADEQDSDSEGSSDEDDHATSNHVTGQEKEVSEPE
HRNSSHLENGSVTTSIADLERQLLGSPNSSLLWIQLMSCHIQQADLNEARETVKRALNGI
HYREESEKLNVWIAWLNLENAYGTEEQMMKVFGEASKANDTKTVWLKMAEIYTESGKIEK
ANELYTKLVKKFSESSKAWSLYARFCLTNKQEAQTLELLARSLRSLPKHKHLKTMNKFAQ
YEFKHGEIERGRTLFEGLIASYPKRTDLWNVYIDLERTRLDRVRALFARMLSLKLNPKKS
KFVFKKWLGIEKEFGDEASQNKVLEQARAYVQASQSNCTKEEGADEQDD
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
tcaagtttattaaattcagtcgaagttgactttcctcgtggtggtggtactcatctaaca
gctgttgaagttaaacaagctggtcatgaaggaaaaacagatgcagatcaaatcttcatt
cctgatcccaagccagtcaaggatacttcttcatcaaagcgtaaaagatctttactcgat
ccttcctcccatcaacgtatcaaatctaacaatatctcagcatctcaaaatacaccattt
caaaatgcatatagaattgaacatcttaatcatcgtcggcttacatctgggctcaaactc
gctggtttgatcatcgaaatccgaccacttgaacttattgtggccttgccgagtcaattg
gttgggcatgttccaatcaccgaaatctcttcttactatactcaaaaacttcaagaaagt
accgatcaagatgacgaggatactgactctgaagatgaccaaagcaattctgacaaggct
gacgattatcaacacagagtgaaatccggtggacttcaaggattgaatgaaattttcaaa
gtgggacaatggattcgctgtatggtcatccatactacttccggaacacctaatatagct
catcgtgcctcccccctggttcgtgctgcccatcgtgtcaaattaaccattgacccagct
cgtctgaatggcgatttggaaaagaaagacttgtctgcaaacatgacattggatggtgct
gtcaaatcaatcgaagacaacggatacgtggtagatctttgcgttccagtaaactcatct
cagcaagcctcttcatctgcacctcaaactgtcactacctttgtcctattctctgatgcc
atcaagatcccccaaactcatcttcacaatcgtgagctttggcaaattggacaaatcgtt
cgatgtcgaatcgataaagtctccaagagtggatctacttgtaccgtctttgtcgacccg
accggtatcgcttcatccttgttaacaacggctatcaacattgactgcgttttacctctt
caccttgtcacctgtcttatcaccgccgtagtgcctgaggaaggtttaaacgtagaattc
ttaggctactacaagggtacaatcgacttgtacaatcttggtgtcggcataggtggtacc
aaggtggaagaccgtttcaaagccggtcagaagatccgtgctcgggtcttatggcatact
cgatcctcttcacctcagaaaacttttagcttaagcttgctggaccattgcgtcaatatg
gtcacaccaggtttgccactcttgctacagaacgacacaccaaacggcttacctagtgaa
agcatcgaacatcttatgcgattcaacattggatacacttttcaatccactagagtttgt
ggtgtcgtcaaggactgggggttatatgtcgaatactctgacaattcaaatcagcagcga
gtcataggtttcattcacatttcagccattcgcgatacccatctctctgacatcttggtc
gaaggttctgggccttatagactcggtacaactcataaagccaaagttgtaggcatctct
cccatcgatggcatgcttcaactctcatcacagccctcagtggtggagcagccttatata
cgaccacaggacgttgcggtgggtgaaatcgtgacagcagaggtgaccagattgtgctct
tcggcattgtttctgtcaatatttggtggacttgattgcgtggtttggcctgatcattac
tccgatgtgaaacttcaacaccctgagaagaagtttcaagctggtatgaagctcacagcc
agggtactgtatgtcaatcccaacaagcaccgaattgctctcactttgcggaaaagtctt
ctggatcccacgttttcttctatcacctcttatgctacagcacagcctggtatggtcacc
gatgcagtaatcacccgcgttaaagcgaggcaccttgaaatagaattctttggtcaaaca
cggggtgtgattcccattcgcgaagcagcggagaaatttagcgagtcgttgtccgatttc
agggctggccgagtagttaaggtccagattctctccgtggatccactggctcgaaagatt
ttagcgagcatcagatgcgctctagacacagaagcctcaaaattaagggaatcgggcaat
gtcggtgatgcagtctttgcgactgtgaagacgattggtgatgaccacacgattttgacc
cttcggcgaaggctaggcaagcgtaacaaaatgggcggagagattccgattccaggcctc
atctctctcagtattcttgcgtggcgacgtaaagtgacgatcgatcaactgaaggaacaa
ctccatgtcggtgatgagatcgacgatttagtcatcacagctaaagatatccagagtaac
ctcatcatcttgggttacgccaagggctcaaagaagcagaagcaagagccggagacggag
cgaccactgttcaactcgtcggcattcgaagtcggtgacttggtcacagggacggtcttg
gacatacacgccaaaaacctgttaatgtttctcaagaaagatggaagcgaaaatgcatgt
gtgggacaaggctttttgtccattgaaaagcttgctactcgtgaaaagaagaactgcgct
gtagtcaaggttgatcgacagacttccaaggtttaccttactttgagatcatctcgtttg
aatcgtggagtccagaaatcggcctccgaggtacgggatcgaccgatcgtctcgatcaaa
gacttgaaaaagggtgataagataagaggatttattcaacggatttgtgaaaaagctggt
ctgctcgttcggatcggtactaatctttctgccaaagttaagatcagtgaactttttgat
caagatattccagattgggttggaaagtttaaagtcggtcaagtggtatctggtgtgatt
atcacgcctgtcaaagcttcccgtggtattcaattgagtcttagagaaaatccatttggt
ccgaaagtttcggatccaaagaagttggtcttggagaaattccaggaaggacaaattgtt
ggtactactattagaaagattgaaaagtatggaatgtttttggccattgacgatgccgga
atcagtggtttgtgccatgttagtcagttatctgatgatgatgaagtcgaccgaaactgg
gcaaagaagtacaaggaaggtatgaggctacaagctgcactggtcaaggttgatttgaag
gcacgtaggatctctttatcgatcaagccttcaattgtcggcgagcaagaattggatagt
ggtgacgatgaagacgaatctgacgatgaggacgtagaagaagaggagcttgaccattcg
aatgttgaaaaggacgattcggtagatatggttgtgacaagtaagagtgtgaatcagcca
ttggctgtacaaatccaagcgccatgtctggcgcttcctggtggtttcaattggaacagc
actgtccagaccagggctgctgatgagcaagattcagattcagaagggtcgagcgacgaa
gatgatcatgccacatctaaccatgtcacgggtcaagagaaggaagtatcggaacctgag
cataggaactcttcacatcttgagaacggctcagtgaccacatcaatagcagacttggaa
cgacaattattaggttctcctaatagctcattgctttggattcaattaatgtcatgtcat
atccaacaagctgatctgaatgaagcacgagaaactgtgaaacgagcattgaatgggatt
cattatcgagaagaatcggaaaagttgaatgtttggatagcttggttgaatttagaaaac
gcttatggaactgaagaacagatgatgaaagtgtttggtgaagcttcaaaggctaatgat
acgaaaacggtttggttgaagatggcggagatttatactgagagtggaaagattgagaaa
gcaaatgagctgtatactaaattggtgaaaaagttcagtgaaagctcaaaggcttggtct
ctgtacgcccgattttgtttaaccaacaagcaagaagctcaaactctagagttattagcc
agaagtttgagaagtttaccaaagcacaaacatcttaagacgatgaacaaatttgcacaa
tatgaatttaaacatggtgagattgaaagaggtagaacgttatttgaaggtttgattgct
agttatccaaaacgaacggatctttggaatgtttatatcgatttggaacgaactcgatta
gatcgagttagagctctttttgctagaatgttgtcattgaaacttaatcctaaaaaaagc
aaattcgttttcaagaaatggttaggtattgaaaaagaatttggagatgaagctagtcag
aataaagtattagagcaagctagagcttatgtacaagcttctcaaagtaattgtacaaag
gaagagggtgcagatgagcaagatgat
DBGET
integrated database retrieval system