Melampsora larici-populina: MELLADRAFT_24633
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Entry
MELLADRAFT_24633 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mlr
Melampsora larici-populina
Pathway
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_24633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_24633
Spliceosome [BR:
mlr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
MELLADRAFT_24633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
PRP4
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_like
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
WDR54
Beta-prop_IFT140_1st
RMC1_N
WD_LRWD1
Beta-prop_SPT8
Beta-prop_DCAF12
Ge1_WD40
CENP-B_dimeris
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
18926924
NCBI-ProteinID:
XP_007404659
JGI:
Mellp1_24633
UniProt:
F4R5C7
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
LQADHANLLSSLDRATRSRQLAVPTNEVAIRVRLRELGEPMTLFGERPEDRRDRLRYVLS
QIAEAKGWELEKDGMEEDENKDEEEDEDEDEEFYTEGTDELLMSRRFIADFSLANARKRI
IRQKLEANLPLNRIMSTRKAVYAELKTYTNLGSQVGDERPISMVRFSPNSKLLATGSWTG
TAKVWNIPSCTPYADEKDSHSDRIGGLAWHPEATIGQSTSSLNMVTGGADSKVQLWSLTS
EKPLRTLEGHGGRVCRVAFHPAGRHVASASFDTTWRLWDAETGTELLTQEGHSREVYSLE
FQSDGALLCSGGLDAIGRVWDLRSGKTVMVLDGHVKDILAIDFSPNGHQIATGSNDDNIR
IWDIRSLKAIYTIPAHLSSVSDVRFFKGGKVEEEVEVPLSGMYLASCGYDGYVKLWSADD
WQLVKALSSEAGGKVMSVDIARDGKFMASGEWTRTFKLW
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ctacaagcagaccatgcgaacctacttagctcactcgatcgcgccacccgatcacgtcaa
ttagccgtcccaaccaatgaagtagcaatccgagtgagactacgagaactcggagaacct
atgacattatttggagaaagacctgaagatagaagagatcgactaagatatgttttaagt
cagattgcagaagcaaaaggatgggaattagaaaaagatggaatggaagaagatgaaaat
aaagatgaagaggaagatgaagatgaagatgaagaattttataccgaaggaactgatgaa
cttttaatgtctagaaggtttattgctgattttagtttagctaatgctcgtaaacggatt
attagacaaaaattagaagctaatttacctttaaatagaatcatgtcaaccagaaaagcc
gtttatgcagaattaaagacttatactaatctcggttctcaagtgggtgacgaacgtcca
atctcgatggtcagattttctccaaattcaaaattattagctactggatcttggactggt
acagcaaaagtttggaatataccaagttgtacaccctatgcagatgaaaaggatagtcat
tctgatcgaatcggtggattggcttggcatccggaagctactattgggcaatcaacttca
agtctaaatatggtcacaggtggtgcagattcaaaagttcaattatggtcacttacttca
gaaaagccattaaggacattagaaggacatggaggacgagtttgtagagtagcctttcat
ccagctggacgtcatgttgcttctgcttcttttgatactacttggcgtttatgggatgca
gaaacaggtaccgaattgttaacacaagagggacattcaagagaagtttatagtttagaa
ttccaatcagatggagctttactttgttcaggtggtttagatgctatcggtagagtttgg
gatttaaggagtggaaaaactgtgatggtattagatggacatgtaaaagatattcttgca
attgatttttctcctaacggtcatcaaattgcaacaggatcaaatgatgataatataaga
atttgggatataagatcattaaaagcaatttatacgataccagcacatctttcatcagtt
tcagatgtaagattttttaaaggtggtaaagttgaagaagaagttgaagttccactcagt
ggaatgtatttggccagttgtggttatgatggatatgttaaactttggtctgctgatgat
tggcaattagttaaagctttgtctagtgaagctggtggaaaagtcatgagtgtagatatt
gctagagatggaaaattcatggcatctggagaatggactagaacatttaaactttgg
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