KEGG   Melampsora larici-populina: MELLADRAFT_24633
Entry
MELLADRAFT_24633  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mlr  Melampsora larici-populina
Pathway
mlr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MELLADRAFT_24633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mlr03041]
    MELLADRAFT_24633
Spliceosome [BR:mlr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    MELLADRAFT_24633
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th PRP4 Beta-prop_SCAP NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st WD40_like Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR19_1st WDR54 Beta-prop_IFT140_1st RMC1_N WD_LRWD1 Beta-prop_SPT8 Beta-prop_DCAF12 Ge1_WD40 CENP-B_dimeris Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 18926924
NCBI-ProteinID: XP_007404659
JGI: Mellp1_24633
UniProt: F4R5C7
LinkDB
Position
Unknown
AA seq 459 aa
LQADHANLLSSLDRATRSRQLAVPTNEVAIRVRLRELGEPMTLFGERPEDRRDRLRYVLS
QIAEAKGWELEKDGMEEDENKDEEEDEDEDEEFYTEGTDELLMSRRFIADFSLANARKRI
IRQKLEANLPLNRIMSTRKAVYAELKTYTNLGSQVGDERPISMVRFSPNSKLLATGSWTG
TAKVWNIPSCTPYADEKDSHSDRIGGLAWHPEATIGQSTSSLNMVTGGADSKVQLWSLTS
EKPLRTLEGHGGRVCRVAFHPAGRHVASASFDTTWRLWDAETGTELLTQEGHSREVYSLE
FQSDGALLCSGGLDAIGRVWDLRSGKTVMVLDGHVKDILAIDFSPNGHQIATGSNDDNIR
IWDIRSLKAIYTIPAHLSSVSDVRFFKGGKVEEEVEVPLSGMYLASCGYDGYVKLWSADD
WQLVKALSSEAGGKVMSVDIARDGKFMASGEWTRTFKLW
NT seq 1377 nt   +upstreamnt  +downstreamnt
ctacaagcagaccatgcgaacctacttagctcactcgatcgcgccacccgatcacgtcaa
ttagccgtcccaaccaatgaagtagcaatccgagtgagactacgagaactcggagaacct
atgacattatttggagaaagacctgaagatagaagagatcgactaagatatgttttaagt
cagattgcagaagcaaaaggatgggaattagaaaaagatggaatggaagaagatgaaaat
aaagatgaagaggaagatgaagatgaagatgaagaattttataccgaaggaactgatgaa
cttttaatgtctagaaggtttattgctgattttagtttagctaatgctcgtaaacggatt
attagacaaaaattagaagctaatttacctttaaatagaatcatgtcaaccagaaaagcc
gtttatgcagaattaaagacttatactaatctcggttctcaagtgggtgacgaacgtcca
atctcgatggtcagattttctccaaattcaaaattattagctactggatcttggactggt
acagcaaaagtttggaatataccaagttgtacaccctatgcagatgaaaaggatagtcat
tctgatcgaatcggtggattggcttggcatccggaagctactattgggcaatcaacttca
agtctaaatatggtcacaggtggtgcagattcaaaagttcaattatggtcacttacttca
gaaaagccattaaggacattagaaggacatggaggacgagtttgtagagtagcctttcat
ccagctggacgtcatgttgcttctgcttcttttgatactacttggcgtttatgggatgca
gaaacaggtaccgaattgttaacacaagagggacattcaagagaagtttatagtttagaa
ttccaatcagatggagctttactttgttcaggtggtttagatgctatcggtagagtttgg
gatttaaggagtggaaaaactgtgatggtattagatggacatgtaaaagatattcttgca
attgatttttctcctaacggtcatcaaattgcaacaggatcaaatgatgataatataaga
atttgggatataagatcattaaaagcaatttatacgataccagcacatctttcatcagtt
tcagatgtaagattttttaaaggtggtaaagttgaagaagaagttgaagttccactcagt
ggaatgtatttggccagttgtggttatgatggatatgttaaactttggtctgctgatgat
tggcaattagttaaagctttgtctagtgaagctggtggaaaagtcatgagtgtagatatt
gctagagatggaaaattcatggcatctggagaatggactagaacatttaaactttgg

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