Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K12623 | U6 snRNA-associated Sm-like protein LSm4 |
|
Organism |
mlr Melampsora larici-populina
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mlr00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_31042
09123 Folding, sorting and degradation
03018 RNA degradation
MELLADRAFT_31042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mlr03019]
MELLADRAFT_31042
03041 Spliceosome [BR:mlr03041]
MELLADRAFT_31042
Messenger RNA biogenesis [BR:mlr03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MELLADRAFT_31042
mRNA degradation factors
5'-3' decay
Lsm complex
MELLADRAFT_31042
Spliceosome [BR:mlr03041]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MELLADRAFT_31042
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
108 aa
LPLALLHGAQGKPMLVELKNGETFNGHLIQSDNFMNLTMREVYLTSSDGEKFWKLSECYI
RGNTIKYIRVTDNVIDIVKQQEDSYRQQNRSARGGAGNGTDRGGSERG |
NT seq |
324 nt +upstreamnt +downstreamnt
cttccacttgctcttctccatggcgcacaaggaaaacccatgttggtagagctcaaaaat
ggtgaaacgttcaatggccatctgattcaatcagataactttatgaatttgactatgaga
gaagtctatctaacaagttcggatggtgaaaagttttggaaactttcagaatgttatatc
aggggtaacacaataaaatacattcgagtgaccgataacgtgattgatattgtaaaacag
caagaagattcatatcgacaacagaatcgatcggcacgtggtggagctggtaatggtaca
gatcgtggtggatcagaaagaggt |