Melampsora larici-populina: MELLADRAFT_32760
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Entry
MELLADRAFT_32760 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
mlr
Melampsora larici-populina
Pathway
mlr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MELLADRAFT_32760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlr03009
]
MELLADRAFT_32760
Ribosome biogenesis [BR:
mlr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MELLADRAFT_32760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
DUF7165
Beta-prop_DCAF12
B-prop_COPA_B_2nd
Beta-prop_Vps41
Beta-prop_WDR35_2nd
VID27
Beta-prop_IFT140_2nd
Beta-prop_EIPR1
Cytochrom_D1
Utp8_b_propeller
Motif
Other DBs
NCBI-GeneID:
18927240
NCBI-ProteinID:
XP_007404856
JGI:
Mellp1_32760
UniProt:
F4R6D4
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MIELHLTIDLPSTFGVASTLIHPATYVNKVVIASEQGGLAIYNVQIGALIHMFQPSLFSR
PTKCRSKGAKVPITYMAQGPAVDILAVGFADGWCSLVDIRFGEEILAVKMGSDSPDDPNE
SITGIAFRSDSDCQLLVTSSSQGHLAIWNMNQSGQLLHILREAHDSAVSGVQFLPGQPIM
LTASGDNSIKLWLFETPTGLPRLLSQRSGHQKPPQLIKYYGDDGKTIISAGKDGTLRSTS
VVRDSRSFEISQGSLAKKASQLATPVSSLRLPPVTGLSYSTSRAKDWDNLLTSHEGHPEA
KSWSVQNKRIGKHSFSLTSHTSFKLAPPEEVTRCVCVTACGNYGLSGTHGTGRIGMWNMQ
SGMKRREFIIPTSSKVRATKTDSKVMGIATDVLNRFVIILTHPGIIYFYDFMSAKLSHTI
TLPCASSIMLLQRDNGLLAVACEDRHVRVLDIETRRTVRELGPLPKPVLDMVFSPDSRWL
VVTSADSVIRTYDLPTGSLIDAFRTHSVATSITFSPTGDFLASAHVDSVGVFLWANRAQF
AEVSYKSLAKDAEIPTLETPLFEGVEDHTTSILESTPRSGTWQEDSLEEGLSLIPDPSSD
GSITLSLMPKSKWQSLLNLEIIKARNKPKEPPKTAEAAPFFLPTLSTNGRKVGLDSISGE
TTSTTQADNGSKKRKFDLGDSALVESEFTRRLMKDESDKNYEDLFEYVKNLSPSALDIEL
RSITTDDQMKALLRALTVRLTSGKEFEMIQAILSVFLKIHGQEIIDIREDLPGDLLLIAQ
EAATSKLKRLVDYGIGVSAFVRGATGVV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttcatcttactatcgatttaccttcgaccttcggtgtggctagcactctg
atacatcctgctacttatgttaacaaagttgtgatagcctctgagcaaggcggtttggca
atttacaacgttcaaatcggtgctctcattcacatgttccagccgagcttgttttccaga
ccgaccaaatgcagatccaagggtgccaaggttccgatcacttatatggcacagggccct
gctgtcgacattctggccgttggtttcgccgatgggtggtgcagcttggtagacattcgc
ttcggagaagagattctggctgttaagatgggatctgattcacctgacgatcccaacgag
tcaatcacaggcatagcttttcgatcggattccgattgtcaactcctcgttactagctcc
tctcagggacacctggctatctggaacatgaaccaatctggacagctcttgcacatcctt
cgcgaagcccacgactccgctgtatcaggtgtacaatttttgccgggtcagcctatcatg
cttaccgctagtggtgacaatagtatcaagctatggttgttcgaaacccctaccggcctg
cctcgattgctcagtcagcgctctggacatcaaaagcctccacagctgataaaatattac
ggcgatgacggtaaaacaattatcagtgcgggtaaagatggaactttacgctccaccagc
gtggtccgagactcgagaagttttgaaattagtcaaggctcactcgccaaaaaggcttct
caattggctacgcctgtttcatcgctacggctgcctcctgtaactggcttatcatattcc
acgtcgagagccaaggattgggacaatctcttaacatctcacgagggacatcctgaagcg
aagtcgtggtcagtccagaacaaacggataggaaaacattccttttcgctcaccagtcac
acatccttcaagctagctcccccagaagaggttacgcgatgtgtttgtgtgacagcatgt
ggaaactatggcttatcaggaactcatggtactggccgaataggcatgtggaacatgcaa
agtggcatgaaacgaagagagtttattataccgacttcttcgaaggtccgggcaactaag
actgatagcaaggtaatgggaatcgcgacggatgttctgaaccgctttgtcatcatcttg
acacatccgggaatcatctacttctatgattttatgtcggcaaaactctctcatactatc
accctgccatgcgcttcttctatcatgcttctacagcgtgataatggtcttcttgcagtc
gcgtgcgaggaccgtcatgtcagagtgttggatatcgaaactaggcggactgtgcgagag
ttgggtccgcttcccaagccggtgcttgacatggttttttcaccagattcgcgttggctc
gtagtgacgagtgcggactctgtgatccggacgtacgatcttcccactggctcgttgatt
gatgcattccggacccatagtgtcgctacttcaatcaccttctcaccaacgggcgacttc
ttagcttcggcacatgtcgatagtgttggagtgtttctttgggcgaatcgggcccagttt
gccgaagttagttataagagtctcgcaaaagacgctgaaatccctacacttgaaactccc
ctctttgaaggcgtcgaggaccacacaacaagtatcttggaaagtactcccagatcggga
acttggcaggaagatagtttggaagaaggattatccttgatcccggatccatcctcagat
ggatcgattacattatctttaatgccgaagtccaagtggcagtctttactgaaccttgag
attatcaaggctcggaataagccaaaagaacctcccaagacagcagaggcggctcctttc
tttttgcccactttgtccacaaacggccgtaaagtcggtttggatagtatctcaggggag
acaacatctacaactcaagcggataacggatctaagaagcgaaagttcgacctcggcgac
agtgctttggttgaatcagaattcaccagaagactgatgaaagatgaatctgataaaaat
tatgaagatctcttcgaatacgtcaaaaacctatcgccatcggccctagacatcgagctg
cgctccatcactacagatgatcaaatgaaggcacttttacgagctcttactgtacgattg
acatcaggaaaagagtttgaaatgattcaagctatcctgagcgtatttttgaagattcat
ggtcaagagatcattgatatcagagaagatcttccgggagacctgttattgattgctcaa
gaagctgcaacttctaaattgaaaagattagtagattatgggattggtgttagtgcgttt
gttagaggtgctacaggggtggtatga
DBGET
integrated database retrieval system