Melampsora larici-populina: MELLADRAFT_33054
Help
Entry
MELLADRAFT_33054 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
mlr
Melampsora larici-populina
Pathway
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_33054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_33054
Spliceosome [BR:
mlr03041
]
Complex A
U1 snRNP components
U1 related factors
MELLADRAFT_33054
Complex B
MELLADRAFT_33054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
18927261
NCBI-ProteinID:
XP_007404314
JGI:
Mellp1_33054
UniProt:
F4R6V7
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
ASLWTEHRSPTGRLYWYNATTSTSSWERPDDLKTPSERALASTPWKEYQTAEGRKYWHHT
ETKETTWTLPDVVREAIEKAAASAPSAPVPPTPGPPVSSTAPTSTPASAPPHPGFVPATQ
NPAMAPSMRPPGSSTPNTSSAPAGFVPPAASLPPRPVTSILHSAPVPTPVTTTLPDFKTP
EEAERAFIGLLRVKGVNPTWTWEQTMRDIITEPLYKALDTLAARKAAWEKFIDNERKREK
ENREKNITRVRARVEIKLPGAPPKLWWTYERLKREMELRAPDVWKLARDDEERKILWEDY
LTDLRQKETTAANQLRGRQQEKLTDLLRAHEEKLDLSGDLETMQWRVAQEAILRSEFFQN
DDDLRKMDDLDMLMVFEEEVKRAEKDSNATKAKQKEDKRRAYRKARAAYIQLLHELKLKG
EIQPGAMWKEVYPLIEADERYQNLVGNPGSSPLELFWDLVDDLDQETEEKAKIVQGILAD
QQKTITETTELDQFLSWLDGHADAAVLDKKTLTYVFIMLHDDVVRVAKEERRRFEKRLRN
QIEDLRYALKKLSPPIELDTPYEEAIERFSHMQEYKSLDGQEDGRKEAFSRYMERLKEKA
TLEEKRNKRKDDDPPRADYRKKSLLQHSDDEGSIISSSKRKKRDLLDEDKPNRHSSPRSG
RRDDIHSSPRAPKDSREDRDHDRGKERDRNGARDRDYDREKDTPRDRARSKAPARGADVE
PEAERDHPKEDIRNLDSDRSRNRDRDRDRSRDTNRDRDRDRDRDRTRDRDHRDRTKDRPD
DRDRARTSISQTDDRDRRRKDFDTDRHNQRHHRSRKDRDYDERDRDRHRSSRYEDEDGPV
PEKKSEGIKDGRADLVDKRARSTELADNLTRPVNNEEERELKVS
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
gcatcgctttggacagaacatcgttcaccaactggacgactctattggtacaatgccacc
acgtcaacatcctcatgggagcgtcctgacgatttaaaaacaccttctgagcgtgcattg
gcttcgacaccttggaaagagtatcaaactgctgagggtcgtaaatactggcaccacacc
gaaacaaaggaaaccacttggacgctgccggatgtggtacgggaggcgatcgaaaaagct
gccgcatcagccccatctgcgcctgtcccgccgacccctggtccaccagtgtcttcaacg
gctcccacatccactcctgcttctgcaccaccgcatcctggttttgtacccgccacccaa
aaccccgcgatggctccgagcatgagacctccaggttcgagcacacccaatacctcgtca
gccccagcaggttttgtaccccccgcagctagtctgccgcctcgtccagtcacttccatc
ctgcactcggcaccggtccctacacccgttacaaccactctgccggacttcaagactcct
gaagaagcagagcgcgctttcatcggccttcttcgagtgaaaggtgttaatcctacctgg
acttgggaacaaacaatgcgagatatcattaccgaacctctctacaaagccctcgacact
ctggccgctcgtaaagctgcgtgggaaaaattcattgataacgagcgcaagcgagagaaa
gaaaacagagagaagaatatcactcgtgtccgggcaagagttgagatcaagttgcccgga
gctccaccaaaactctggtggacttacgagcgtctcaaaagggagatggaattgcgcgct
cctgacgtttggaaacttgcccgggacgacgaagagcgcaaaatcttatgggaagactac
ttgactgacctccgacagaaggaaacaacggccgccaatcaattacggggcagacagcag
gaaaaattaacagacttgttgagggctcatgaagaaaagttggatttatctggcgacctt
gagactatgcaatggcgtgttgcccaagaagcgatcttgcgcagcgaatttttccaaaac
gacgacgatttgcgaaagatggacgacctcgacatgctgatggtgtttgaagaagaagtc
aagcgagccgagaaagattcgaacgcaacgaaagccaaacagaaggaagacaaacgacgc
gcttaccggaaggctcgggccgcatatatccaactactacatgaactgaaactaaaaggc
gaaattcaacctggcgctatgtggaaagaggtctaccctcttatagaagctgacgagcga
taccaaaatttagttggaaacccgggtagctctccacttgagttgttctgggacctagtg
gacgatctagatcaagaaactgaagaaaaagccaaaatcgtccagggcattttggctgat
caacaaaaaactatcactgagaccacggaactcgatcaattcttaagttggctcgatggt
catgcagatgcagcggttctggacaaaaagactttgacgtatgtcttcataatgttacat
gatgatgtcgttcgagtggctaaagaggaaaggcggagattcgagaaacgtttgcgcaac
cagattgaagacttgcgatatgcacttaaaaagttgtcgccaccaatcgagctagatacg
ccttatgaagaagctatcgagcgtttttcgcatatgcaagaatacaagtcacttgatggg
caagaggatggtcggaaggaagcctttagcaggtatatggagcgtttgaaggagaaagct
accttggaagaaaagagaaataagcgaaaagatgatgatcctccaagagccgattacaga
aagaaatccttactccaacattcagacgacgaaggaagtatcatatcaagttccaagcgc
aaaaagagggacttattagatgaggataagcctaaccgacattcctcacctcgaagcggt
cgacgtgatgacatacattcctctccccgggctccgaaggactcgcgcgaagacagagac
cacgaccggggtaaagagcgtgatcggaatggggcaagggatcgtgattatgatcgtgag
aaggatacccctcgggatcgtgcgcgtagtaaggcacccgctaggggagcagacgtggaa
cctgaagcagaacgagatcatccgaaggaggatattcggaatctggattcagatcgatcc
aggaatcgggacagagatagagatagaagccgagatacgaaccgtgaccgtgaccgtgac
cgcgaccgcgaccgcactcgagaccgagatcacagagaccgcacgaaagaccgtcccgat
gatcgtgatcgagctcgtacgtccatatctcagacggatgatagagatcgacgaaggaaa
gacttcgacacggatcgacataaccagaggcaccatcgctcacgcaaagatcgtgactac
gatgagcgcgaccgcgatcgtcatcgatccagccgatatgaagatgaagatggacctgtt
cccgaaaagaaatctgaaggaattaaagacggccgggctgatttggtcgacaaaagagct
cgaagtactgagctcgccgataacctcactcggcccgtaaacaatgaagaagagcgtgaa
ttgaaagtaagttga
DBGET
integrated database retrieval system