Melampsora larici-populina: MELLADRAFT_34668
Help
Entry
MELLADRAFT_34668 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
mlr
Melampsora larici-populina
Pathway
mlr03020
RNA polymerase
mlr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MELLADRAFT_34668
09124 Replication and repair
03420 Nucleotide excision repair
MELLADRAFT_34668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlr03021
]
MELLADRAFT_34668
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_34668
Transcription machinery [BR:
mlr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
MELLADRAFT_34668
DNA repair and recombination proteins [BR:
mlr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MELLADRAFT_34668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
18927407
NCBI-ProteinID:
XP_007407873
JGI:
Mellp1_34668
UniProt:
F4RFP0
LinkDB
All DBs
Position
Unknown
AA seq
159 aa
AA seq
DB search
MNAPNRYELYTLGEGESKLTIDEDTKIPNACTVTINKEDHTLGNMLRAQLLQMEYVIFAG
YKVPHPLEPRFIIKVQTDGTHTPIQAIQEAVKSLILSLDKMRNSLQNEFRVAKAVGVGQM
TADDGLGGLNGPIGAAGYGGGYNSSMPYGTGGNQTAYGF
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcccaatcgatacgagctttacaccttgggtgaaggtgaatcgaaattaaca
attgatgaagacacaaagattcccaatgcttgcactgtaacaatcaacaaggaagatcat
actctcggaaacatgcttcgcgctcagcttctgcagatggaatacgtgatttttgctggt
tacaaagtaccacatcccttggaacctcgcttcatcatcaaagtacaaaccgatggcact
catacgcctattcaagcaatccaagaagccgtcaagtcgttaattctctcacttgataaa
atgcggaattctttgcaaaacgagttcagggttgctaaggccgtcggagtaggtcagatg
acagctgatgatgggctcggcggattgaatggtcccattggagctgctggatatggtgga
ggatataactcaagcatgccctatggtacaggaggaaatcaaaccgcttacggattttga
DBGET
integrated database retrieval system