Melampsora larici-populina: MELLADRAFT_35775
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Entry
MELLADRAFT_35775 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mlr
Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlr03009
]
MELLADRAFT_35775
Enzymes [BR:
mlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MELLADRAFT_35775
Ribosome biogenesis [BR:
mlr03009
]
Eukaryotic type
Pre-60S particles
Helicases
MELLADRAFT_35775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
SWI2_SNF2
BLYB
Motif
Other DBs
NCBI-GeneID:
18927498
NCBI-ProteinID:
XP_007409892
JGI:
Mellp1_35775
UniProt:
F4RL43
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MTLKTNTKAGSFSSLDPPISQWIVDAVTAMGFSHMTPVQANTIPLFMQNKDVVAVTGSGK
TLSFVIPILEKVLSMERAEKKAIRAIVISPTRELATQIFEVFSSIIRCHPSSVNQLGEDS
EAKDDSDCVRAMLLIGGTGASSIRKDMKEFRENGADILIATPGRLEEFFVARHALVNLKA
LEMLVLDEADRLLDLGFAPVLTNVISHLPKQRRTGLFSATLLNDGLTELIKVGLRNPVKI
VVKVQTNKQLLVEDDRVPSGLINYFLEVPKIEWKMSQLIRLLNQMIIPKPQGDGAHKFIV
YMSTCACVDYYYKILSKLSELENFAIYSLHAQQSPTRRSITYNSFKTSPLSKPTVLLCTD
LVARGLDLPDIDVVIQYDPPKDVRNFFHRIGRTARAGRGGKAIVFLQSGRELDYIGRKTP
TTPRTTHPTLPDTDEEASVLNSVIKTIVKTDRDLHDKAVNAFVSYIRFYSNHEASYIFQL
KHLDLLQLGFEGFGLIRMPKMPELKDYQGKDGPLTSEGFKKEGHDFKVSK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgactctcaagacaaacacgaaagctggttcatttagctcactcgatcctcctatatca
caatggattgtggatgccgttacagcaatgggcttttctcatatgactcccgtacaagcc
aatactataccactattcatgcagaacaaggacgtggtagctgttactgggtctggaaaa
acactttcatttgtgatacctatcttggaaaaagtcttatctatggaaagggctgaaaag
aaagcgatacgtgcgattgtgattagtcctacaagagaactggctacacaaatattcgaa
gtattctcctcaatcatacggtgtcatccatcctctgtaaaccaactcggggaagattca
gaagcaaaggatgattctgattgcgtgagagcaatgttactcattggtggaactggagca
agttcgattaggaaagatatgaaagagtttcgagagaatggtgcagatatcttgatagct
actccaggtcgtttagaagagttcttcgttgctcgtcatgctcttgtcaacttgaaagca
ttagaaatgctagtacttgatgaggctgataggctgctcgatcttggatttgctcccgtc
ttgaccaacgtaataagtcatctacccaaacaaaggcgtaccggactcttttccgcgacg
ctcctcaacgatggattgaccgagctcatcaaagttggtcttcgaaacccagtgaagatt
gtcgtcaaagttcaaacaaacaagcaactcttggtagaggatgaccgagtgccgagtggt
ttaatcaattattttctcgaagtacctaaaatcgaatggaagatgtctcaattgatcaga
ctattaaatcaaatgatcattccaaaaccacaaggtgatggagctcataagtttattgtc
tacatgtctacttgcgcctgtgtcgactactactataaaatattgtctaagctatcggag
ctggaaaactttgcaatctattcactccatgctcaacaatctcccacaagacgttccatc
acttacaattccttcaaaacttccccactctccaagcctaccgtacttttatgcaccgat
ctcgtggccaggggactcgatctacctgacattgacgtcgtgatccaatacgatcctcct
aaggatgtccgcaacttttttcatcggattggacgtactgcaagagctggacggggtggg
aaagctatcgttttccttcaaagtggtcgggagttggactatattggtcggaaaacccca
actactccaagaacaacacatcctacgctacctgataccgatgaagaggcctctgtgtta
aattcggtcatcaagactatcgtaaagactgatcgtgatctccatgacaaggcagtcaac
gcatttgtgtcttacattcgattttactcgaatcatgaggcatcttatatattccaattg
aaacatcttgatctattacaacttggatttgaaggattcggattgattaggatgcctaag
atgcccgaactgaaagattatcaaggtaaagatggcccattgacatctgaaggctttaaa
aaggaaggacatgattttaaggtgagcaaataa
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