Melampsora larici-populina: MELLADRAFT_37375
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Entry
MELLADRAFT_37375 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
mlr
Melampsora larici-populina
Pathway
mlr03430
Mismatch repair
mlr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MELLADRAFT_37375
03460 Fanconi anemia pathway
MELLADRAFT_37375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_37375
DNA repair and recombination proteins [BR:
mlr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
MELLADRAFT_37375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18927636
NCBI-ProteinID:
XP_007412266
JGI:
Mellp1_37375
UniProt:
F4RT88
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
IDLNSVHKLTSSQVVIDLQTAVKELLENSLDAGANAVEIRFKEYGLDGLEVIDNGTGIPE
QDLATVGLNHHTSKLTTFEDLGQLKTFGFRGEALSSLCGLSKVKLQTSTSETEPRGWAVD
FDKLGNVTSKKICSRSRGTTIGISELFYPLPVRQKQFAKDYKKHFAQAQTLLQAYGLIST
SLTLKVYNQPGKGGKVAQFQTRSNGNLRQNFSDIFTAKAAATVIDLNLELSINPDKVVLK
SQLEAEAEAALSRTVHKSDFANMKIIGQFNLGFIIVGLGEEDVLIVDQHASDEKYNFERL
QRDTKLSGQRLLTPRTLDLPAAEELTAMEHRDLLEMNGFGILIDEDAPVGQRVKLVAQPV
SRDTIWGPSGMSFCLCSLTGAPPLRPSKTRKMFASRACRSSVMIGDSLTTGQMRSILDHM
GMMEEPWACPHGRPTMRWVSSKFATFSF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atcgatctcaattcagttcacaaacttacctcctcccaggtagtgatcgatctgcaaacc
gcggttaaagagcttctcgaaaacagtctagacgctggtgctaatgccgttgagatcagg
ttcaaggaatatgggctcgatggacttgaagtaatcgacaatggtactggtatacccgaa
caagatttagctacagtcggcctcaatcatcatacatccaagctcaccacgttcgaggac
ctaggacaactcaagacatttgggtttcgcggtgaagcgcttagttcactttgtggactt
tctaaggtcaaactccaaacttcgaccagtgagacagaaccaagaggctgggccgttgat
tttgacaaactcggaaatgttacatccaagaaaatttgttcccgttcaagaggtacaaca
attggaatcagtgaactgttctacccgctacctgttcgacagaagcagtttgcgaaagat
tacaaaaaacattttgcacaggctcaaacattacttcaagcctatggcctcatctcgact
agtttgaccctcaaagtctacaatcaaccaggaaaagggggaaaggtcgcccaattccag
actcgctccaatggcaacctcagacagaatttttccgatatttttactgctaaagcagca
gctacagtaatcgatttgaaccttgaactctccatcaatccagacaaggtggtactcaag
tctcaattagaagcagaagcagaagcagctttaagtcgaacggttcacaagagtgatttt
gcaaacatgaagattattggacaattcaatcttggcttcattattgtaggattgggtgag
gaggatgtgcttattgtggatcaacacgcgagtgatgaaaagtacaactttgaacgtctt
cagcgagatacgaaactatcaggccagcgcttacttacgccacgaactttggatttgccg
gcggctgaagagctgacggccatggaacatcgggacttgctcgaaatgaatggctttgga
attttgatcgacgaagatgcaccagttggacagcgagtgaagctggtggctcagcctgtg
agccgggataccatctggggtccttctggtatgtctttttgtctatgtagccttacaggg
gcaccaccgctaagaccttccaaaactagaaaaatgtttgcgtctcgagcatgtagaagc
agtgtgatgattggagattctttgacgactgggcagatgagatctatcctggaccacatg
ggaatgatggaagagccttgggcatgtccacatggaagacctacgatgcgatgggttagt
tctaaatttgccacattcagtttttga
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