Melampsora larici-populina: MELLADRAFT_37939
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Entry
MELLADRAFT_37939 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
mlr
Melampsora larici-populina
Pathway
mlr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MELLADRAFT_37939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_37939
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MELLADRAFT_37939
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MELLADRAFT_37939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
NAD_kinase_C
Motif
Other DBs
NCBI-GeneID:
18927682
NCBI-ProteinID:
XP_007413128
JGI:
Mellp1_37939
UniProt:
F4RVF4
LinkDB
All DBs
Position
Unknown
AA seq
206 aa
AA seq
DB search
MSTTESPSSRSIVVPGQAFAQTTDNQKSISATYQPGPGVFSRDGKLYASTAGYAKREGGV
IHSPQTVSVVRPTRLARVPVVGTIVTGLVTKLNKLQASLAIITVEDVPLPVGQDFPGVIR
AQDVRQVDKDKVKIWTCFRPGDIVRAEVISFPTGSTGYLLATFRNELGVVFAQNTRTGNL
MKALSWEEMIDEETGEREPRKVAGPA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccaccgaaagcccttcttcacgttcgatcgtcgttcctggccaggcattcgca
caaacaacagacaaccaaaagtcaatctcagctacctatcagcctggtcctggagtcttc
tcgcgcgatggaaagttatatgcatctacagcgggctatgcaaaacgcgaagggggcgta
atacactctcctcagacagtctcggtcgttcgtcctactcgccttgcaagagttccagtt
gttggaacaatagtaactggtttagtaactaaattgaataagctacaggcttcattggcc
atcattaccgtagaagatgtacctttaccggtcgggcaagattttcctggtgtgattagg
gctcaagatgtaagacaagtagataaagataaggtcaagatttggacctgctttcggccg
ggtgatatagtaagggccgaggtgatttcatttccaactggatccactggatatctactt
gcaacctttcgtaatgagctaggcgttgtttttgcgcagaacacccgaactgggaatctg
atgaaggctctgagctgggaagagatgattgacgaagagacaggtgaaagagaaccgcga
aaggtagctggacccgcatag
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integrated database retrieval system
