Melampsora larici-populina: MELLADRAFT_41001
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Entry
MELLADRAFT_41001 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mlr
Melampsora larici-populina
Pathway
mlr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MELLADRAFT_41001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlr03021
]
MELLADRAFT_41001
03036 Chromosome and associated proteins [BR:
mlr03036
]
MELLADRAFT_41001
Transcription machinery [BR:
mlr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
MELLADRAFT_41001
Chromosome and associated proteins [BR:
mlr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
MELLADRAFT_41001
PBAF complex
MELLADRAFT_41001
GBAF(ncBAF) complex
MELLADRAFT_41001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
18927934
NCBI-ProteinID:
XP_007418582
JGI:
Mellp1_41001
UniProt:
F4SB49
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
KKKPEEIAKQYLLSQTQPIIIPSYASWFDLDTIHPLEQKALPEFFNGRNRSKVPSIYKDY
RDFIVNSYRLNPSEYLTLTSCRRNLAGDVCAIMRVHAFLEQWGIINYQVDADTRPAPVGP
PFTGHFRVLLDTPRGLMPLHSGVVTKHNKNPPNLLTPDVPHPSQSSETTHTLYNHALQIR
KNIYERTETGHEVEVDEAKVQNMLQSNGTTNNELTAERSPIQCDVCSVECTKLSYHHTKL
RTYDLCPGCYSQGRFPSTMNAAEFIRMDRDPSNPPIPAEWSDQERLLLLEGLEMFADDWE
KIVDHVGGTKTKQQCILEFLRLPIEDEFLKSVEKDVGGPVGLGKMPLNGVENPVMSVLTF
LMSLVEPDVTARLAGTSIENIKEDIESELVRDSENLARKEVEEEKKKRKAPDGNTAMEVD
EPTMKIQPIQTTSPKVQKPIEKMVGIALGSAATKASTLSSEADSEMNKLLGNLTEQTVNK
LELKLQQFEKLESLVEIERRNLEQFRQSLLIERMTLVKEIGKARDLESGGVKAKEVEGSD
VTNSMMNGGLGVMEIA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
aaaaagaaaccagaagagatagctaagcaataccttttatcacaaactcaaccgatcatc
atcccatcctatgcatcctggttcgatcttgataccattcatccacttgaacaaaaggct
ttacctgaattcttcaatggtcgtaatcgatcaaaggttccatcgatctataaagattac
cgtgattttatcgttaatagctatcgactcaatccttccgaatatctcactctaacttcg
tgtagaagaaacttggcaggtgatgtatgcgcgattatgcgcgttcatgctttcttagag
caatggggtatcatcaactatcaggtcgatgctgatacgcgtccagcccccgttggccct
cccttcactggacacttccgtgtacttctcgatactccacggggtcttatgccgctccat
tccggtgtagtcactaaacacaataagaaccctccaaaccttctcactcccgatgtacct
catccatcccaatcatctgaaaccactcatactttatacaatcatgcacttcaaatccgc
aagaacatctacgagcgcaccgagacaggtcacgaagtagaagtggatgaagccaaggtt
caaaacatgctgcaatcaaatgggactaccaataacgagctaactgctgagcgtagcccg
attcaatgcgatgtctgttcagtcgaatgtaccaaactctcataccaccacaccaaactt
cgcacctacgatctatgtccaggttgctatagccaaggtagattccctagcaccatgaac
gctgccgagtttattagaatggaccgagacccttcaaacccacctatcccagcagaatgg
agcgaccaagaacgtttactcttactcgagggcttggagatgtttgcggacgattgggaa
aagattgtagatcacgtgggtggcactaaaacgaaacaacaatgtatcttagaattcttg
agattaccgatcgaggatgagttcttgaaatccgtcgaaaaggatgtgggaggacctgtg
gggttaggaaagatgccattgaatggagtcgagaatccagtaatgtcagtcttgactttc
ttgatgagtctagtcgaaccggatgtcacagcaagattggcaggtacttcaattgagaat
atcaaagaggacatcgaaagcgagttagtaagagatagcgaaaacttggctaggaaggaa
gtggaagaggagaagaaaaagcggaaggctcctgatggtaacacggccatggaagttgat
gaaccgacaatgaaaattcaacccatccaaacgacatctcccaaagttcagaagcctatc
gagaagatggtagggatcgcactaggttcagcagctacaaaagcttcaactctaagttca
gaagcagattcagagatgaataaattactcggtaatctaacagaacagaccgtgaataaa
ttagaattaaaattacaacaatttgaaaaactcgaatcattagttgaaattgaaagaagg
aatttagagcaatttagacaaagtttattgattgaacggatgacgttagttaaagagatt
ggaaaagcaagagatttggaaagtggaggagtgaaagctaaagaagttgaaggttctgat
gtcactaattcaatgatgaatggtggattaggagtaatggaaattgcttga
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