KEGG   Melampsora larici-populina: MELLADRAFT_41015
Entry
MELLADRAFT_41015  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mlr  Melampsora larici-populina
Pathway
mlr03030  DNA replication
mlr03410  Base excision repair
mlr03420  Nucleotide excision repair
mlr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MELLADRAFT_41015
   03410 Base excision repair
    MELLADRAFT_41015
   03420 Nucleotide excision repair
    MELLADRAFT_41015
   03430 Mismatch repair
    MELLADRAFT_41015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mlr03032]
    MELLADRAFT_41015
   03400 DNA repair and recombination proteins [BR:mlr03400]
    MELLADRAFT_41015
Enzymes [BR:mlr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MELLADRAFT_41015
    6.5.1.6  DNA ligase (ATP or NAD+)
     MELLADRAFT_41015
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MELLADRAFT_41015
DNA replication proteins [BR:mlr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MELLADRAFT_41015
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MELLADRAFT_41015
DNA repair and recombination proteins [BR:mlr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MELLADRAFT_41015
   NER (nucleotide excision repair)
    Other NER factors
     MELLADRAFT_41015
   MMR (mismatch excision repair)
    Other MMR factors
     MELLADRAFT_41015
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 18927937
NCBI-ProteinID: XP_007418612
JGI: Mellp1_41015
UniProt: F4SB84
LinkDB
Position
Unknown
AA seq 635 aa
MNDRIPYSSLVHTFTLIDGTTKRLEITKYLSQYLMKVINRTPNELIKIIYLCINRLCPDY
EGIELGIGESILIKAIGSSMGRTPTQVKADFKKVGDLGLVAQNSRSTQKTMFKPKLLTVN
SVYQDLKTIATTSGHSSQAKKVGIITKMLAACEGEEAKYIIRSLEGKLRIGLAERTVLVA
LATAVVTTGTSNPTKRKSKETLSTEILEGTNLVKSVYSEIPSYDLVIPALLKGGIQGLRE
NCKLTPGVPLKPMLAKPTKSISEVLDRFEGQSFTCEYKYDGERAQIHYLEDGTISIFSRN
SENMSEKYPDMLDQMKKSIKTDITKSFVLDSEVVAWDPICKKILPFQELSKRKRKDVKRS
EIDIKIKIFGFDLLYLNDEALIKQDLKYRRMKLKEHFNEIEDEFNLAKSLDSDKVEEIQV
FLDESIKASCEGLMVKMLNGENAYYEPSRRSMNWLKVKKDYLAGLGDSLDLVVIGAYFGK
GKRTNVYGAFLLGIYDQSTESYQSICKIGTGFTDEVLESHYQKLKPLELLQKKSYYDTGD
VKPDVWIENRIVWEVLAADLSLSPIYSAARGLCGDGTRGISLRFPRYIRERDDKGPEDGT
GPDQVAEMYERQVCTQTQGSKGKLKKKEGEDDDFW
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgaatgatagaatcccatattctagtttggttcatacctttacgttgatcgacgggact
accaaacgactagaaattactaaatatctaagtcaataccttatgaaagtcatcaaccga
actcccaatgaactaatcaaaatcatttacctatgtatcaaccgattgtgtcctgattat
gaaggtatcgaacttggaattggtgaatcgatcttgatcaaagctattggatcttcaatg
ggtagaacacctactcaagttaaagctgattttaaaaaagtgggagatttaggactagta
gctcaaaacagtcgatctactcaaaaaacaatgtttaaaccaaagctcttgactgttaat
agtgtatatcaagatctaaagacaatagctaccacttcgggacattcatctcaagctaag
aaagtgggaattattactaaaatgttagcggcttgtgaaggcgaagaagctaaatatatt
attagatcacttgaaggaaaacttaggatcggtttagctgaacgaacagtcttagtggct
ttagctactgcagtggtgactacaggtacttcaaacccaaccaaacgtaaatccaaagaa
actttatcaaccgaaattctagaaggcaccaatttagtcaaatcagtttattcagaaatc
ccatcttatgatttagtgattcctgctttattgaaaggaggaatccaaggattaagagag
aattgtaaattaacaccgggtgtacctttaaaacctatgttagctaaacctactaaatcg
atttcagaagtcttggatcgcttcgaaggtcaatcgtttacttgtgaatataaatatgat
ggggaaagagctcagattcattatttagaagatggaacgattagtatctttagtaggaat
tctgaaaacatgagtgaaaagtatccagatatgttagatcaaatgaaaaaatcgatcaag
acagatatcacgaaatcatttgtattagattcagaagtagtagcatgggatccgatttgt
aaaaagatcttaccgtttcaagaattaagtaaacggaaacgaaaagatgtgaaaaggtca
gaaatcgatattaagattaaaatctttggatttgatttactttatttaaatgatgaagcc
ttaatcaaacaagatttaaagtatcgtcgaatgaagttaaaagaacattttaatgagatt
gaagatgaatttaatttagctaaaagtttagatagtgataaagttgaagagattcaagtg
tttttagatgaaagtattaaggcttcttgtgaaggtttgatggtgaaaatgttaaatggt
gaaaatgcttattatgaaccaagtagaaggagtatgaattggcttaaagtcaaaaaagat
tatttagcaggtttaggagattcattagatttagtagtcatcggagcttattttggaaaa
ggaaaacgaacaaacgtatacggagcgttcttactaggaatctatgatcaaagtactgaa
tcatatcaatcgatttgtaagatcggaaccggattcacagatgaagttttagaatcacat
tatcaaaagttaaagccattagagcttttacaaaaaaaatcttattatgatacaggtgat
gtgaaaccggatgtttggattgagaatcggatcgtttgggaagttttggcggctgatttg
agtttgagtccgatttatagtgctgctagaggtttatgtggtgatggtacaagagggatt
tcattaagatttcctagatatattagagaaagagatgataaaggacctgaagatggaact
ggacctgatcaagtggctgaaatgtatgaaagacaagtttgtacacaaacacaaggaagt
aaagggaaattaaagaaaaaagaaggtgaagatgatgatttttggtga

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