Melampsora larici-populina: MELLADRAFT_42233
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Entry
MELLADRAFT_42233 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
mlr
Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_42233
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
MELLADRAFT_42233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
CSD2
Rrp44_CSD1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
18928038
NCBI-ProteinID:
XP_007406327
JGI:
Mellp1_42233
UniProt:
F4RB69
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MNLGPGQTNFGQGNQQMRKSLFAPYLPQASIPPLLAAAKLVIGVLRVNKRNRSDAYVATD
ALDSDIYICGSKDRNRALEGDVVAVELLDVDEVWGTKKEKEEKKRKKEENQAFDPRIQQN
TRREDKKRDDVEVEGQGLMLFEEEEVNDEQRPNFAGHIVAVVERMPGQLFSGTLGLLRPS
SAATKEKQEAERREREGVDLRGGQREEQRPKIVWHRPTDKRVPLIAIPVDQAPADFLADP
NKYASTLFIAGIKRWPITSLHPFGTLVEELGPIGDIEVETNALLKDCNFSSEEFSENVVR
CLPPVPWTIPDREYEVRRDFRSQTVFTIDPETAKDLDDALHVTKNEDGTFDVGVHIADVT
HFVKPNTALDREARKRATTVYLVQRAVPMLPPSLSEQLCSLNPGQDKLTFSVVFKLTSDA
KIIDTWFGKSVICSAAKLHYSQAQTMLSDQNAAPELKIEKNGVQVAQIYESVRMLGQLSR
QLRKRRFEEGTLRIDSIKLNFKLDEGGLPDDCQISISTEANQLVEEFMLLANIAVAKKVA
AGLPEQAFLRRHEAPIDRRLEAFVKKAKKSGFDVDTSSAGSLMKSFEAIEVVGRAPHFVM
QLLATKAMVKAKYFCAGALDIAKWSHYALNIPLYTHFTSPIRRFADIMVHRQLEAVLLSA
CDVKFSMDPDTVSKSAQHCNVKRSAARLAEEQSQHLFLCLLIADLTAKYGPVVREATVLG
VLNEAFDVAVPDFAIEKRVHVDQMPIDNHVHDEHTNTLKLYWKQGVDVVSYLSEHSNDAH
IHSVRHHAERHAKLMEASSQAIQAESALFDDDDDDVVQHPRGSVSGPGGISEREQRSAQR
MKSVEKKKLTWEGVEKIEAAPGVTHCVQTIKELMTVPVIVTADTSKSPPVLKIFAVNPFA
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcggccctggtcaaaccaactttggtcaagggaatcagcaaatgcgtaaatct
ttgtttgcgccttacctacctcaagcctctattccgcctcttttggctgcagcaaaattg
gttattggagtcctgcgtgtcaacaagcgtaacagatccgacgcctacgtggccaccgat
gccctggattcagatatctacatctgcggatccaaagatcgtaaccgtgctctagaaggt
gacgtggtcgcggtcgagctgctcgatgttgatgaagtttggggtacgaagaaggagaag
gaagagaagaagcgcaagaaagaagaaaaccaggccttcgaccctcgtattcaacaaaac
actcgacgtgaagacaagaaaagagatgatgtcgaagttgaaggtcaaggattgatgctc
tttgaggaggaggaagtcaatgatgagcaacgtccaaactttgctggtcacattgttgct
gtggtggaaagaatgccaggacagctcttcagtgggactcttggtttgcttcgaccatct
tcggctgcgaccaaagagaagcaagaagctgaacgacgtgagcgagaaggagttgatctt
cgtggtggacaacgtgaggagcaacgtcctaaaattgtttggcaccgaccgaccgataag
agggtacctttgatcgccatcccggtcgatcaagctccagccgacttcttagcggatccc
aacaagtatgcgtctactctttttatcgcgggaatcaagcgctggcctattacttctctt
catcctttcggtacgctcgtcgaagagttgggtccgattggtgacattgaagtggaaaca
aatgcgcttctcaaagactgtaacttttcctctgaagagttttcggaaaacgttgtgaga
tgtctgccgcctgtgccatggactatcccagatcgcgaatacgaagttagacgagacttc
aggtcacaaactgtcttcaccattgaccccgagaccgctaaagatctcgacgacgcctta
catgtgaccaagaatgaagatgggacgtttgatgtcggtgtgcatatagccgatgtcact
cacttcgtcaaaccaaacaccgctctggaccgcgaggctcgtaagcgggctaccactgtc
tatcttgtccaacgtgctgtgccgatgcttccaccatcattatccgaacaactctgctcg
ctaaatcccggtcaagataaactcaccttcagtgttgtattcaagcttacctctgacgcg
aaaatcatcgacacctggtttggcaaatcagtcatctgttcagctgctaagctgcactac
agccaagcccaaactatgctttctgaccaaaacgcagcacctgaactcaagattgaaaag
aatggtgtccaggtcgctcagatttatgaatctgtacgcatgttgggccaactctctcgt
cagcttcgcaaaagaagattcgaggagggtactttgaggatcgatagcatcaagttgaac
tttaaactcgatgaaggcggcttgccagatgactgccaaatttcgatcagtactgaagcc
aaccagttagtcgaagaattcatgctattggccaacatcgccgttgccaagaaagtcgcc
gccggattacctgaacaagccttcttgagacgtcacgaagcaccaatcgatcgtcgttta
gaagcttttgtgaagaaggccaagaagtcgggattcgatgtcgacacatccagtgcgggt
tcgttgatgaagtctttcgaagccattgaggtggtgggtagggcaccgcactttgtgatg
caattattggccaccaaagccatggtgaaggccaagtatttttgtgccggcgctttggat
attgctaaatggtctcattatgccttgaacattcctttgtacactcatttcacatcccct
atccggcgctttgctgatatcatggtccaccgtcaactagaggccgtactcttgagtgcc
tgtgatgtcaagttcagcatggaccctgataccgtttctaagagcgcgcaacattgcaat
gtgaaacgatctgcagcacgattggccgaagaacaatctcagcaccttttcctttgtctc
ttgatcgctgatttgacggccaaatatggaccggtggtgagagaggcgaccgtgcttggg
gtcttgaacgaggctttcgatgtggctgtacctgacttcgcgattgagaagagagtacat
gtcgatcagatgccgatcgataatcatgtccacgatgaacataccaacaccttgaaattg
tattggaagcagggagtggatgtcgtctcatatctgtccgagcactccaatgatgctcac
atacattcagtacgacaccacgccgaacgacatgcgaagctgatggaggcttcctcgcaa
gccattcaagccgagagtgcattattcgatgatgacgatgatgatgtagtgcaacatcct
cgtggctcagtatcgggcccaggtggtataagtgaacgtgaacagaggagcgctcaaagg
atgaaaagtgtcgaaaagaaaaaattgacttgggagggagttgagaagattgaagccgct
cctggtgttacccattgtgttcagactatcaaagaattgatgactgtccccgtgatcgtc
acagctgacacatcaaagagtccaccggtcttgaaaattttcgctgtcaatccctttgct
tga
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