Melampsora larici-populina: MELLADRAFT_44021
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Entry
MELLADRAFT_44021 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
mlr
Melampsora larici-populina
Pathway
mlr03420
Nucleotide excision repair
mlr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MELLADRAFT_44021
09124 Replication and repair
03420 Nucleotide excision repair
MELLADRAFT_44021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mlr04121
]
MELLADRAFT_44021
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_44021
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlr04147
]
MELLADRAFT_44021
Ubiquitin system [BR:
mlr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
MELLADRAFT_44021
DNA repair and recombination proteins [BR:
mlr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
MELLADRAFT_44021
TCR (transcription coupled repair) factors
Cul4-CSA complex
MELLADRAFT_44021
Exosome [BR:
mlr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
MELLADRAFT_44021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
KH_DTX3L
WAC_Acf1_DNA_bd
DUF7779
Motif
Other DBs
NCBI-GeneID:
18928149
NCBI-ProteinID:
XP_007411762
JGI:
Mellp1_44021
UniProt:
F4RRK6
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MIRGILIHLDRTLWIRSDHKHSIWHLGLDLFRKHVLGVDGNRLSLLLSAVVCQQVDFDRL
GRSTPVSSLQSINQLLHTTVGAEGFDRIILLPLIKSTDLFYEDEGKRLIIEVISDSLRVG
GPQGYLRHSLVRIEAEVSRLSKLFKTSDETINEHTQSAILQSVERNLIYHHLDTLLSKGF
GEMLVGFPERESSQSIQDLYKLIQNLGKESIQKLRNAFLIWMKQIGNRIVGVGYETSEQR
EKEDEEMIEKLIEFKLKMNDLVKICFESEREMFHVVKEAFESFINQRQNKPAELIAKYLD
QKLRQGNRNMTDIELDQCLNQVLILFRYTQGKDIFEEFYKRDLSKRLLLSKSASIDTERN
MVMKLKEECGGGFTAKLETMFRDIETSVDINNSYQTVLKKHKEHEEERSIELNVSVLTAG
SWPSHHTAELQINLPNELNSSLKNFENFYQSKYLGRKLKWNHLLGQFILSASFHGSGGKI
KKKELSVSTYQGIILLLFNEIESHESLGFEKIVEMSGLPVGEAARTLQSLACGKVRVLVK
TPKGKDVNQTDCFSLNHEFKHDNFKIKINQIQFKETVMERQCTTKKVVTERSTLLQLSIV
RIMKSRKQMKHHELVMEIINQLKDRFSVQPKEIKVGIESLIGRDYIERVDGSMDEYHYLA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaggtattcttattcatctcgatcgaactctttggattcggtcggatcacaag
cattccatttggcatttgggcttggaccttttcagaaagcacgtcctaggtgttgacgga
aatcggttgtctcttttactctcagctgtagtctgtcaacaagtcgactttgatcggttg
ggtaggtcaacccccgtcagttcacttcaatcaatcaaccaactgctgcatacgaccgtt
ggtgccgaaggcttcgatcgaatcattctactgcctctcatcaaatctactgatctgttt
tatgaagatgaaggaaaaagattgataatagaagtgatctcggattctcttcgtgtgggt
ggtcctcaaggttatctgagacacagtcttgttagaatcgaagccgaagtttcacgactg
agtaaattattcaaaacatctgatgaaacgatcaatgaacatacccaatcagccattcta
caatctgtggaacgaaatctgatttatcatcatcttgatactttattatctaaaggattt
ggagagatgttagtaggctttcctgaaagagaatcaagtcaatcaattcaagatttgtat
aaactcatacaaaacttgggtaaagaatcgattcaaaaattgagaaatgcgtttttaata
tggatgaaacagattggaaatcggattgttggtgtgggttatgagactagtgaacaaagg
gaaaaagaagatgaagagatgattgagaagttgattgagtttaaacttaaaatgaatgac
ttggttaagatttgttttgaatctgaaagagaaatgtttcatgttgttaaagaagctttt
gagagttttatcaatcagagacaaaataaaccagctgaattgatagctaaatatttagat
caaaaacttagacaaggaaatcgaaacatgactgatattgaattagatcaatgtttaaat
caagttttgattttgtttaggtatactcaagggaaggatatatttgaagaattttataaa
cgtgatttaagtaaaagattattactttctaaatctgcttcgattgatactgaaagaaat
atggtgatgaaattaaaagaagaatgtgggggtggatttacagctaaattagaaactatg
tttagagatattgaaacttcagttgatattaataattcgtatcaaacagtgttgaagaaa
cataaagaacatgaagaagaacgttcaattgaattaaatgtatcagttttaacggccggt
agttggccaagtcatcatacagctgaacttcaaatcaatttaccaaacgaattgaattca
tcattgaagaactttgaaaacttttatcaatctaaatatttaggacgaaaacttaaatgg
aatcatttacttggtcaatttatcctttcggctagttttcatggatctggaggtaagatt
aagaagaaggaattatcggtttcgacttatcaagggattattttacttttgtttaatgag
attgaaagtcatgaaagtcttggatttgagaagattgttgagatgtcaggtttacctgtt
ggagaagcagctcgaactttacagagtttagcttgtggtaaagtaagggtattggtaaag
acacctaaaggaaaagatgtaaatcagactgattgctttagtttgaatcatgaatttaaa
catgataattttaagatcaaaatcaatcaaatccaatttaaagagactgtgatggaacgt
caatgtaccactaagaaagtcgtgacggaaagatctacattattacaactttcgattgtt
aggattatgaaatctagaaaacaaatgaaacatcatgaattagtgatggagatcattaat
caattaaaagataggttttcagttcaacctaaagagattaaagttgggattgaaagtttg
attggtagagattatatcgaaagagttgatggttcgatggatgaataccattacttggct
tga
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